Methylibium sp. Pch-M: C1M51_15195
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Entry
C1M51_15195 CDS
T05827
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metp03000
]
C1M51_15195
Transcription factors [BR:
metp03000
]
Prokaryotic type
Helix-turn-helix
Other families
C1M51_15195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
PAS_4
AAA_5
AAA_16
AAA_2
PAS_8
HTH_30
AAA
HTH_50
PAS
HTH_22
HTH_23
AAA_22
HTH_29
NB-ARC
HTH_7
NACHT
nSTAND3
Phage-MuB_C
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QAZ40663
UniProt:
A0A4P6GWX5
LinkDB
All DBs
Position
complement(3166639..3168768)
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AA seq
709 aa
AA seq
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MSIPSVHPTPSTGRRRREEAAQRPIASALPLDGEHVLSINESHERCAALGLSRIGAPDYT
PLGRADFTVTRERNRRLFAHAAPVMELLFDQIVKTQSMVVLTDAQGTILHSIGDEDFLEK
AGKVALAPGVNWAECTKGTNGMGTALVDETAVLVHADEHFMHANHFLTCQAAPILDPRGN
ILGVLDVSGDRRGYHQHTMGLVKMSARMIENHWLNDDFSDALRLHIHPRMEFIGTLLEGI
LAIDRDGRLLGANRSALDLLGMSGAALRMHTVASLLGTPLGAIVDRGRALMGAPMRMALP
NGQTVHVQARCNWPLWPGQWTGTGGGLRDAAADGTPATPATEDVGPTSPAATARDAATRS
PRSAPAADGGAPAETPPEPEVTFARLQTGDLQIEALISKLRRVLDRDIPVLILGEAGSGK
EMLARAIHRESRRAHRPFISVQCASTPEAQLEAELLGYAEGVFPGARRKGAVGKLVQASG
GTLFLDEIGGLPLGLQARLLRVLQERQVTPLGALQPQEVDLALIGATDRNPRDLIDTHRI
REDLYYRLNGLAVKLPPLRERSDLMALVRRLLADEAPGAPLMLAPDVEALLQRYDWPGNL
RQLANVLHTAAVMAAGEPVITREHLSDDFLEEAQLRAAPGAAAPGGSAPGVVRAMASGID
SSGKTLEELEREMIRHAVDAADGNISVASKRLGISRNTIYRKLRWREPE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccccagcgtgcaccccaccccgagcacgggccgccgccgccgcgaagaggcg
gcccagcgaccgatcgccagcgccctgcccctcgacggcgagcatgtgctgtcgatcaac
gaatcccacgagcgctgtgccgcgctgggcctgagccgcatcggcgcgcccgactacacg
ccgctcggccgcgccgacttcacggtcacccgcgagcgcaaccgccgcctgttcgcccat
gccgcgccggtgatggaactgctgttcgaccagatcgtgaagacccagagcatggtcgtg
ctgaccgacgcgcagggcaccatcctccactccatcggcgacgaagacttcctggagaag
gccggcaaggtggcgctggcgcccggcgtcaactgggccgagtgcaccaagggcaccaac
ggcatgggcaccgcgctggtcgacgagaccgcggtgctggtgcatgccgacgagcacttc
atgcatgccaaccacttcctgacctgccaggccgcgcccatcctcgacccgcgcgggaac
atcctgggcgtgctcgacgtgtcgggcgaccggcgcggctaccaccagcacaccatgggg
ctggtgaagatgtcggcgcgcatgatcgagaaccactggctgaacgacgacttcagcgac
gcgctccgtctgcacatccatccgcgcatggagttcatcggcacgctgctcgaaggcatc
ctggcgatcgatcgcgacggccgcctgctcggcgccaaccgcagcgcgctcgacctgctg
ggcatgagcggcgccgcgctgcgcatgcacacggtggccagcctgctgggcacgccgctc
ggtgccatcgtcgaccgcggccgcgcgctgatgggcgcgccgatgcgcatggcgctgccc
aatggccagacggtgcatgtgcaggcccgctgcaactggccgctgtggcccggccagtgg
accggcacgggcggcggcctgcgcgacgcggcggccgacggcacccctgccacgccggca
accgaggacgtcggcccgacgtcgcctgccgcgaccgcgcgcgacgccgcaacccgcagc
ccccggtcggccccggcagccgacggcggtgcaccggccgaaacgcccccggaacccgaa
gtcaccttcgcgcgcctgcagaccggcgacctgcagatcgaggcactgatctccaagctg
cgccgggtgctcgaccgcgacatcccggtgctgatcctcggcgaggccggcagcggcaag
gagatgctggcacgcgccatccaccgcgaatcgcggcgggcgcaccggcccttcatctcg
gtccagtgcgcctccacgcccgaggcgcagctcgaagccgagctgctgggctacgccgag
ggcgtgttcccgggcgcgcggcgcaagggggcggtcggcaagctggtgcaggcctccggc
ggcacgctgttcctcgacgagatcggcggcctgccgctcgggctgcaggcccgcctgctg
cgcgtgctgcaggagcgccaggtcacgccgctgggcgcgctgcagccgcaggaggtcgac
ctggcactgatcggcgccaccgaccgcaacccgcgcgacctgatcgacacccaccgcatc
cgcgaggacctctactaccggctcaacgggctggcggtgaagctgccgccgctgcgcgag
cgctccgacctgatggccctggtgcgacggctgctcgccgacgaggcgcccggcgcaccg
ctgatgctggcgccggacgtcgaggccctgctgcagcgctacgactggcccggcaacctg
cggcagctcgccaacgtgctgcacaccgccgcggtgatggccgccggcgagccggtgatc
acccgcgagcacctgtcggacgacttcctcgaggaggcccagctgcgggccgcccccggc
gccgcggcgcccggcgggtccgcgccgggcgtggtgcgtgcgatggcgagcggcatcgac
agcagcggcaagaccctcgaggagctggagcgcgagatgatccgccacgcggtggacgcc
gccgacggcaacatctcggtcgcttccaagcgcctgggcatcagccgcaacaccatctac
cgcaagctgcgctggcgcgagccggaatga
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