Methylococcus geothermalis: GNH96_06935
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Entry
GNH96_06935 CDS
T06585
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
metu
Methylococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metu03021
]
GNH96_06935 (rpoS)
Transcription machinery [BR:
metu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GNH96_06935 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Rv2175c_wHTH
PBP_sp32
Motif
Other DBs
NCBI-ProteinID:
QJD31350
UniProt:
A0A858QC41
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All DBs
Position
1451167..1452108
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AA seq
313 aa
AA seq
DB search
MSAGCEIEVDAVDDGGAPGWRDEASDECGEGAEVGSELDATRIYLNQLGKWKLLTAEEEK
HFGRRALEGDEAARCLMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLIRAVEKFEPD
RGFRFSTYATWWIRQTIERALMSQVRAIRLPVHVAKEMNVVLKAYRSLSVKIQGVPTALD
VARQLGKSPERVEQLLRLSEKDLSADAPITADSSKSLLDMAPDDGQSPITDTLLAERLEQ
KIGEWLDRLNSRQCEVLQRRFGLGGHEVATLEEVALDMGITRERVRQIQREAQLKLRGML
EAEGYTADAVLLN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggttgcgagatcgaggtggacgccgtcgatgatggcggggcgccagggtgg
cgggatgaagcttccgatgaatgcggagaaggggccgaggttggttccgagctcgatgcg
acgcggatttacctgaaccaattggggaaatggaaacttctgacggcggaggaagagaag
catttcggacggcgtgccctcgaaggcgatgaggccgcccgctgcctcatgatcgaaagc
aatctgcgtctggtcgtcaagattgcacgccgctatctgaaccggggtttgcctttgctc
gacctgatcgaagagggcaatctcggcctgatccgggccgtcgagaagttcgagccggac
cgcggtttccgcttttccacctacgcaacctggtggatacggcagacgatcgagcgcgcc
ctgatgagccaggtccgggccatccggcttccggttcatgtggccaaggaaatgaacgtg
gtactgaaggcctaccggagcctgtccgtcaaaatacagggggtgccgacggctctggat
gtggcccggcaactcggcaaatctcccgagcgggtcgagcagcttctgcggctgagtgaa
aaggatttgtcggccgatgcgccgatcaccgccgattcctccaaatccctgctcgacatg
gcgccggatgacggtcagagtccgataacggatactctgctggcggaacgactcgaacag
aaaatcggcgaatggctcgatcgactgaattcccgccagtgtgaggttctccagcgccgc
ttcgggctcggtgggcatgaggtggcgacgctcgaagaggtggccctggatatggggatc
acccgcgaaagagttcgccagattcaaagagaggcgcagctcaagctgcgcggcatgctg
gaggcggaaggatataccgccgacgcggtattgctgaactga
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