Methylococcus geothermalis: GNH96_11285
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Entry
GNH96_11285 CDS
T06585
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
metu
Methylococcus geothermalis
Pathway
metu00521
Streptomycin biosynthesis
metu00523
Polyketide sugar unit biosynthesis
metu00541
O-Antigen nucleotide sugar biosynthesis
metu01100
Metabolic pathways
metu01110
Biosynthesis of secondary metabolites
metu01250
Biosynthesis of nucleotide sugars
Module
metu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
metu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GNH96_11285 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GNH96_11285 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GNH96_11285 (rfbC)
Enzymes [BR:
metu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GNH96_11285 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJD30500
UniProt:
A0A858Q9H3
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Position
complement(2440533..2441090)
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AA seq
185 aa
AA seq
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MKVEQTSLPGVMLISPKVFGDARGYFKETWSRQRYQDAGLPADFVQDNLSFSRKGILRGL
HFQNPRPQGKLVQVLQGEVFDVAVDIRRGSPQFGRWFGTVLSAENHLQMYVPEGFAHGFC
VLSEAAMFAYKCTEYYQPSADCSLRWDDPDIGIDWPLASAPELSAKDRDAMLLRDFPQDR
LPAYP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcgaacagacctccttgccgggcgtgatgctgatttcgcccaaggtattcggc
gacgcccgcggctatttcaaggaaacctggagccgccagcgttaccaggatgccggactg
ccggccgatttcgtgcaggataacctttccttttcgcgcaagggcatcctgcggggcctg
catttccagaatccgcggccccagggcaagctcgtgcaggtgctgcagggcgaagtcttc
gacgtggcggtggacatccggcgcggatcgccccaattcggccgctggttcggcacggtg
ctgtcggcggagaaccatctgcagatgtatgtgccggaaggcttcgctcacggtttctgc
gtgctgagcgaggccgccatgttcgcctacaagtgcaccgagtattaccaaccgtccgcc
gattgttcgctgcgctgggacgatccggacatcggcatagactggccgctggcgtccgcg
cccgagctctcggccaaggaccgggacgccatgctgctccgggacttcccgcaggacagg
ctgccggcgtatccatga
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