KEGG   Methanobrevibacter sp. TLL-48-HuF1: K4897_03795
Entry
K4897_03795       CDS       T08254                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
metv  Methanobrevibacter sp. TLL-48-HuF1
Pathway
metv03030  DNA replication
metv03410  Base excision repair
metv03420  Nucleotide excision repair
metv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:metv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K4897_03795
   03410 Base excision repair
    K4897_03795
   03420 Nucleotide excision repair
    K4897_03795
   03430 Mismatch repair
    K4897_03795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metv03032]
    K4897_03795
   03400 DNA repair and recombination proteins [BR:metv03400]
    K4897_03795
Enzymes [BR:metv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     K4897_03795
    6.5.1.6  DNA ligase (ATP or NAD+)
     K4897_03795
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     K4897_03795
DNA replication proteins [BR:metv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    K4897_03795
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     K4897_03795
DNA repair and recombination proteins [BR:metv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     K4897_03795
   NER (nucleotide excision repair)
    Other NER factors
     K4897_03795
   MMR (mismatch excision repair)
    Other MMR factors
     K4897_03795
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: URN50125
UniProt: A0A9E7IVU5
LinkDB
Position
777013..778668
AA seq 551 aa
MKYQELVDVYSALENTTKRLEKTEIISDFLLKLDSTTLEQVGLLILGSVFPAWSDKEIGI
GNKLVMQAVGEAVGVTPDKVEDAVRDHGDIGLACISLYAKKSQTTFFSQPLTIDFVFKSL
RKLSEKSGARSTKRKIDIILEMLSQASASEAKYLTRTILEELRIGVGEGVVRDAIAQAFN
IDKSVVERAMMLTNDLGLIAVVAKEKGEAGLKELNLTPGTPVKPMLAQLAPPIPEIISEM
GVAICETKYDGIRLQVHRHDNEIKIFTRRLENITHALPEIVDLFNEYLPHEDYIVEGEVI
ATRDGKPLSFQNILHRVRRKHNIDEAMEQVPLKVFLFDLLYYIVPMIDEPLLKRRKKLEE
IVNTTPDEINLSNMVYGTPDTVKEVENLFELSLAQHHEGIMIKDAGEPYIPGLRGKKMLK
YKAEPETLDMVVVGGTYGIGKRGDFVGSYLVSLRDEDNNLKTVAYVATGLDDATLEYLTK
KMKEYELSTKGREIVVEPKIVLEVAFSEIVKSPEYETGYSLRFPVVKNIRKDKGINDIDT
VERLLSMYETQ
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaaatatcaagaactggtagatgtatattctgctctggaaaatacaactaaaagactg
gaaaaaacagagattatatctgattttttattaaaattagacagtactactcttgaacag
gtaggtttactaatattaggcagtgtatttcctgcctggagtgataaagaaataggaatc
ggaaataaattggttatgcaggctgtcggtgaagctgtaggagttacaccggacaaagtt
gaagatgcagttcgcgatcatggtgacattggacttgcatgtattagtttatatgctaaa
aaatcacaaactacatttttttcccagcctttaacaatagattttgtatttaaaagctta
agaaagctttctgaaaaaagcggggccagatcaacaaaacgtaaaatcgacataatttta
gaaatgctgtctcaggcttcagccagtgaagcaaaatatttaacacgaactattcttgaa
gaacttagaattggtgttggagaaggtgttgtaagagatgcaatagcccaggcattcaat
attgacaaatcagttgttgagagagctatgatgcttacaaatgatttaggtttaatagct
gttgttgcaaaagaaaaaggagaagccggacttaaagagttaaacttaactccgggaact
cctgtaaaacctatgcttgcacagcttgcaccgccaattcctgaaatcatcagtgaaatg
ggcgttgctatctgtgaaaccaaatatgacggaatccgtcttcaggtacacagacacgac
aatgaaataaaaatattcacaagaagacttgaaaacattactcatgcactgcctgaaatt
gtagatttgtttaatgaataccttcctcatgaggactatattgtagaaggtgaagtaata
gctacaagagacgggaaacctctatctttccagaatatccttcatagggtcagaagaaaa
cacaatatcgatgaagctatggaacaggtccctctaaaagttttcctgtttgatttatta
tattatatagttccaatgatagatgaacctctgcttaaaagaagaaaaaaacttgaagaa
attgtcaacaccacacctgatgaaatcaatttaagcaatatggtttatggaactccagat
actgttaaagaagtggaaaatctatttgaattatccctggctcaacatcatgaaggaata
atgattaaagatgctggagaaccttatattccaggacttcgtggtaaaaaaatgcttaaa
tataaagcagaacctgaaacattagatatggttgttgttgggggaacctacggtatcggt
aaaagaggagattttgtcggatcatatttagtgtctctacgtgatgaagacaacaattta
aaaacagttgcttatgtagctacaggtcttgatgatgctaccttagaataccttactaaa
aaaatgaaagaatatgaactatctacaaaaggcagagaaatcgttgtagaacctaaaatc
gtattggaagtggcatttagtgaaattgttaaaagtcctgaatatgaaaccggatactcc
ctgcgtttccctgttgttaaaaatattagaaaagacaaaggaataaatgatattgataca
gttgaaaggctgctttcaatgtatgaaactcaataa

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