Methylobacterium sp. XJLW: A3862_23165
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Entry
A3862_23165 CDS
T05508
Name
(GenBank) helicase
KO
K19789
DNA repair protein RadD
Organism
metx
Methylobacterium sp. XJLW
Brite
KEGG Orthology (KO) [BR:
metx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metx03400
]
A3862_23165
DNA repair and recombination proteins [BR:
metx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
A3862_23165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
UPF0547
DZR_2
DZR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AWV18051
LinkDB
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Position
5107108..5108814
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AA seq
568 aa
AA seq
DB search
MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLEQDPLAR
VAIVTHSRELVAQNFSELSRAWPEAPAGIFSAGLGRREADAQVLVCGIQSVADRLDAVGP
RDLVIVDEAHLIPRAADTRYGRFLAGLRALTPGLRVAGFTATPYRLDSGRLDAGEHRLFS
GIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV
AELAEYGGSRRAWLAFCAGLAHADAVRDAVRAEGYACESVSGETPRRERDRIVAAFRAGQ
IRCLTSVGVLGTGFNVPEVDLVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLV
RMHGPVDAVTVRSATQGLSGAGAPRAKPCPGCGALIALNASTCEACWTEPEADADAEAPH
EAAADDELAILSADPGLPDPEPAGPAPAPETGGSGAAWHPVTTLNLEAAPDGLDLVLGWR
DGAAEAGWRVRLRPERSGYEREKAVSWWRGLGGGRDAPMTAAGFLEGAGSLARPAAVRVR
PGRVSEQIECRTREGRILGERRTPGPAG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcctgcgggactatcagcgcgccagcctcgacgcgctctcggccgcctgggcg
cggggaggggcggacgatgcggcgcccggccacctgatcgtgctgcccaccggggccggc
aaggcgctggtcatcgcggccctcgcccgggagaccctggagcaagaccccctcgcccgg
gtggcgatcgtcacccacagccgcgaactcgtcgcccagaatttctcggaactgagccgc
gcctggccggaggcgccggccgggatcttctccgccgggctcgggcggcgggaggccgac
gcgcaggtgctggtctgcggcatccagtcggtggccgaccggctcgacgcggtggggccc
cgcgacctcgtgatcgtcgacgaggcccacctgatcccccgcgccgccgacacccgctac
ggccggttcctggcgggcctgcgggcgctgacccccgggctgcgggtggcgggcttcacc
gcgaccccctaccggctcgattcgggccgcctcgacgcgggcgagcaccggctgttctcc
ggcatcgcctacgaggccgacacgttcacgctgatccggcgcggcttcctggcgcccctc
gtctccaaggcgacgctgacccagctcgacgtctccggcgtcggccggcggggaggcgac
tacatcccgggcgagctggaggcggcggtcaaccgcgactggatcacccgcgcggcggtc
gccgaactcgcggaatacggaggttcccgccgggcctggctcgccttctgcgccggcctc
gcccatgcggacgccgtccgcgacgccgtgcgggcggaagggtatgcctgcgagagcgtc
tcgggcgagaccccgcgccgggagcgcgaccggatcgtggcggcgttccgggccggacag
atccgctgcctgacctcggtgggcgtgctcggcaccggcttcaacgtccccgaggtcgat
ctggtggcgctgctgcgcccgacccgcagcaccgggctctacgtgcagcaggttggccgg
gcgctgcgctgcgcccccggcaaggccgacgcgctgatcctcgattatgccgggctggtg
cggatgcacggtcccgtggacgccgtgacggtccggagcgccacccagggcctgagcggg
gcaggggccccgcgcgccaagccctgccccggctgcggcgccctgatcgcgctgaacgcc
tccacctgcgaggcctgctggaccgagccggaggcggacgcggacgccgaggccccgcac
gaggccgcggccgatgacgagctggcgatcctctcggcggatcccggattgccggatccc
gaaccggccggccctgcccccgcgccggagaccggcgggtccggggccgcctggcatccg
gtcacgaccctgaacctggaagccgcgccggacggactcgacctcgtgctcggctggcgg
gacggcgccgccgaggccggctggcgcgtgcgcctgcggccggagcgcagcggctacgag
cgggagaaggcggtgtcctggtggcggggtctcggcggcgggcgcgacgcgccgatgacc
gccgcgggcttcctggagggcgccgggagcctggcgcggccggccgccgtccgtgtccga
ccgggccgcgtatcggagcagatcgagtgtcgcacccgcgaaggccggatcctgggcgag
cgccggacgcccggtcccgccggctga
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