Phytobacter sp. MRY16-398: MRY16398_46470
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Entry
MRY16398_46470 CDS
T05735
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
mety
Phytobacter sp. MRY16-398
Pathway
mety00550
Peptidoglycan biosynthesis
mety01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mety00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MRY16398_46470
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mety01003
]
MRY16398_46470
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
MRY16398_46470
Enzymes [BR:
mety01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
MRY16398_46470
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MRY16398_46470
Glycosyltransferases [BR:
mety01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MRY16398_46470
Peptidoglycan biosynthesis and degradation proteins [BR:
mety01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
MRY16398_46470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP1_TM
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
BBE79591
UniProt:
A0A348DJC4
LinkDB
All DBs
Position
complement(4851334..4853871)
Genome browser
AA seq
845 aa
AA seq
DB search
MAGNDREPIGRKSRPSRPAKEKVSRRRVREEEYDDYEDDDGDEQDSAPRKGKGKGGKPRG
KRRWFWLLLKICIVGAVLLAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMPISK
NEMVKLLEATQYRQVTKMTRPGEFTVQAKSIEMIRRPFDFPDSKEGQVRARLTFDGDRLD
SIENMDSNRQFGFFRLDPRLITMLSSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHD
GISFYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIVDARY
SKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQAMLVGMVKGASIYN
PWRNPKLALERRNLVLRLMQEQKVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQE
LQAKLGDDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALIKQRKLDDLETAMVVVDRF
SGEVRAMVGGATPQFAGYNRAMQARRSIGSLAKPATYLTALSQPDKFRLNTSIADAPISL
RLSNGQVWAPQNDDHRFSGQVMLVDALTRSMNVPTVNLGMAMGLPAVTDTWLKLGAPKDQ
LTANPSMLLGALNLTPIEVAQAFQTIASGGNRATLSALRSVIAEDGTVLYQSYPQSERAV
PAQAAYLTLWTMQQVIQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGREVTITW
VGRDNNQPTKLYGASGAMAIYQRYLANQSPIPLDLTPPEDITTMSVDDMGNFICGGGGVR
SLPVWTTSPETLCQQNPMMQQPQQGNPFDQSTPPPQQQQPQQQPPQQQEKSDGVAGWIKD
MFGSN
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatgaccgcgagccaattggacgtaagagcagaccttcacgtccggcaaaa
gagaaagtaagtcgtcgtcgagtcagagaagaggaatacgacgattacgaagatgatgat
ggcgatgagcaggactcagcgccgcgcaaagggaaaggtaaaggcggtaaacctcgcggt
aagcgccgttggttctggctgctgttgaaaatttgtatcgtgggtgcggtgctgctggcc
atttatggcgtgtacctggatcagaagatccgcagccgtatcgatggcaaagtgtggcaa
ctgccggctgccgtctatggccgtatggtcaaccttgagccggatatgcccatcagcaaa
aacgagatggtcaaactgctggaagccacacagtaccgtcaggtgacgaagatgacgcgt
cctggcgagtttaccgtgcaggcgaaaagcattgagatgatccgccgcccgtttgacttc
cctgatagcaaagaagggcaggtccgggcacgtctgacgtttgatggcgaccggctcgat
agcattgagaacatggacagcaaccgtcagttcggtttcttccgtctcgatccgcgtttg
atcaccatgctttcctcgcctaacggcgaacagcgtctgtttgtcccgcgtagtggtttc
ccggatctgctggtggatacgttgctggcgaccgaagaccgccatttctacgagcatgac
ggtatcagtttttactcgattggccgtgcggtgctggcgaacctgaccgccggacgtacg
gtgcagggggcgagtacgctgacccagcaattggtaaaaaacctgttcctgagcagcgag
cgttcctactggcgtaaggctaacgaagcctatatggcgctgatcgtcgatgcccgttac
agcaaggatcgtatccttgaactgtacatgaacgaagtgtacctcgggcagagcggtgat
aacgaaatccgtggtttcccgttggcaagcctttactactttggccgtccggtggaagag
ctgagtctcgaccagcaggcgatgttggtcgggatggtgaaaggggcgtcaatctacaac
ccgtggcgtaaccctaaactggccctggagcgacgtaaccttgtcctgcgcctgatgcaa
gagcagaaggtgattgaccaggagctttacgacatgctcagcgctcgtccacttggtgtg
cagccgcgtggtggcgtgatttcgccgcagcctgcgtttatgcagatggtccgtcaggag
cttcaggctaaactcggcgatgacaaagtgaaggacttgtcgggggtgaagattttcacc
acctttgattctgttgcgcaggacgcggcagaaaaagcggcggtggaaggtattccggcc
ttgatcaagcagcgtaaactggacgacctggaaaccgcgatggtggttgtggatcgcttc
agtggcgaagtccgtgcaatggtcggcggggcgacgccgcaatttgcgggctataaccgt
gcaatgcaggcgcgccgctctatcggctcgttggcaaaaccggcgacctacctgacagcg
ctaagccagccggataaattccgtctgaatacctccattgccgatgcgccgatttcactg
cgtctgtccaatggtcaggtctgggcaccgcaaaacgacgaccaccgttttagcggtcag
gtgatgctggtggatgcgttaacgcgctccatgaacgtgccgacagttaacctcgggatg
gcaatggggctgcctgcggtgaccgacacctggttgaaattaggtgcgcctaaagatcag
ttaacggctaacccgtccatgctgttgggggcgctcaacctgacgccgattgaagtcgcg
caagcgttccagaccatcgccagcggcggtaaccgcgcaacgttgtctgcgctgcgttca
gtcattgcagaggatggtacggtgctgtaccagagttatccgcagtctgagcgtgcggta
cctgcacaggcggcctatctgaccctgtggaccatgcagcaggttattcagcgcggtacc
gggcgccagctcggcgcgaaatatccggggctgcatctggcagggaaaaccggtaccacc
aacaacaacgtcgatacctggtttgccgggattgacgggcgtgaagtgacgattacctgg
gttgggcgtgataataaccagccgaccaagctgtatggtgcgagcggggcgatggctatc
tatcagcgctatctggcaaaccagtcgccaattccgctggatctgacgccgccggaagat
atcaccaccatgagcgtggatgatatgggcaacttcatttgcggcggtggcggtgtgcgt
tcactgccggtctggacgaccagcccggaaacgctgtgccagcaaaatccgatgatgcag
cagccgcagcagggtaatccgttcgatcagtcaaccccgccgccgcaacagcagcagcct
cagcaacagccaccacagcagcaagagaagagcgacggtgttgcaggctggattaaagat
atgttcggtagtaactaa
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