Martelella endophytica: TM49_11085
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Entry
TM49_11085 CDS
T03801
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mey
Martelella endophytica
Pathway
mey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TM49_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_11085
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM49_11085
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TM49_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
PriA_CRR
ResIII
Helicase_C
zinc-ribbons_6
Mu-like_Com
TF_Zn_Ribbon
AAA_16
AAA_30
AAA_22
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AJY46096
UniProt:
A0A0D5LPN9
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All DBs
Position
2444346..2446553
Genome browser
AA seq
735 aa
AA seq
DB search
MISDSLDLFGKPPNLVSAVPVMVPLPVDGPYSYAVPEGMVVMPGSVVQVPVGPRKVIGIV
WDEAADLVDPKKLRPIEHVFDCPPVSDGMRRFVDWVASYTLTPPGLVARMAVRAPAALEP
EPMVEGVRLTGVQPERMTPARSRVLELAEEVPVWTRLGLAHAAGVSTSVVDTMMKHGVFE
TIFLPPPPAVGLPEPDHAPPDLSPDQQVSADKLVDAVRAGGFSVTLIDGVTGSGKTEVYF
EAIAETLRQGRQVLILLPEIALTSAFLGRFESRFGAKPGEWHSDLAPRMREKVWRQTSEG
TVKVVAGARSALFLPFDDLGLIIVDEEHDTAYKQEDRVFYNARDMAVVRARIGGFSAVLA
SATPSVESQVNALSGRYDRLHLPGRFAEAALPDLTTVDMRRHPPARGGFLSPVLIDAVER
SVKRGEQALLFLNRRGYAPLTLCRVCGHRFQCPNCSSWLVEHRFRGQLMCHHCGHAEPVP
EACPECGTLDHLVACGPGVERIAEEVEKHFPERRTIILSSDMAGGVKRLRLELEAVANGE
ADIVIGTQLVAKGHNFPLMTTVGVVDADIGLANGDPRAAERTFQLLSQVTGRAGRTGLAS
RGLIQTYQPMHPVMQAIVSGDAEAFYEREIGEREKSGLPPFGRLAAVIVSAETRAEAEVH
ARGLRASAPHGRTISVLGPAEAPLALVRGRYRFRLLVHGRRTDDIQAYLRAMLENGPKQR
GSVRVQLDIDPQSFL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagattcgctcgatcttttcggaaagccgcccaatctggtgagcgccgtcccg
gtgatggtgccgctgccggtggacgggccttattcctatgccgttccggaaggcatggtg
gtgatgccgggttcggtcgtgcaggtgccggtcgggccgcgcaaggtgatcggcattgtc
tgggatgaggccgccgatctcgtcgatcccaagaaactgagacccatcgaacatgtattc
gactgcccgccagtgagcgacggcatgcgccgcttcgtcgactgggtcgcctcctatacc
ctgacgccgcccggtctcgttgcccgcatggcggtgcgcgcgccggccgcgctcgagccg
gagccgatggtcgagggcgtgcggctgaccggcgttcagccggagcggatgacgccggcg
cgcagccgcgtgctggagctggcggaagaggttccggtctggacccgccttggccttgcc
catgcggcgggcgtcagcaccagcgtcgtcgacacgatgatgaagcatggcgtgttcgaa
accatcttcctgccgccaccgccagccgtcggcctgcccgaacccgaccacgcgccgccg
gacctctcgcccgatcagcaggtctcggccgacaagctggtggatgcggtcagggcaggg
ggcttttcggtgacgctgatcgacggcgttaccggctccggcaagaccgaggtctatttc
gaggcgatcgccgagacgctccgccaggggcggcaggtgctgattctgctgccggaaatc
gcgctcacgtcggccttcctcggtcgattcgaaagccgctttggggccaagcccggcgaa
tggcattcggatcttgccccgcgcatgcgcgaaaaggtctggcgccagacttcggaggga
acggtcaaggtcgtcgccggtgcgcgttcggccctgttcctgccgtttgacgacctcggc
ctcatcatcgtcgacgaggaacacgatactgcctacaaacaggaagaccgggtgttctac
aacgctcgcgatatggctgtggtgcgcgcccgaatcggcggtttttcggcagtgctcgcc
tccgccacgccctccgtcgaaagccaggtcaacgccctttcggggcgctacgaccggctg
catctgcccggtcgattcgccgaagccgcccttccggacctcacgacagtcgacatgcgc
cgccatccgccggcgcgtggcggcttcctgtcgccggtgctcatcgacgcggtcgagcgt
tcggtgaagcgcggcgagcaggcgctcctgttcctgaaccggcgtggctatgcgccgctg
acgctctgccgggtctgcggccatcgcttccagtgccccaattgctcaagctggctggtc
gagcatcgcttccgcggccagctgatgtgccaccactgcggccatgccgagcccgtgccg
gaagcctgcccggaatgcggcacgctcgatcatctcgtcgcctgcgggccaggcgtggag
cgcattgccgaagaggtcgagaagcattttcccgaacgtcgcaccatcattctgtcctcg
gacatggccggtggcgtcaaacggctgaggctggaactggaggcggtggcgaatggcgag
gccgatatcgtgatcggcacccagctcgtcgccaagggccataattttccgttgatgacg
acggtgggtgttgtcgacgccgatatcgggcttgccaatggcgatccgcgtgcggccgag
cgcaccttccagctgctgtcgcaggtgaccggccgcgccgggcgcacggggcttgcgagc
cgtgggctgatccagacctatcagccgatgcatccggtgatgcaggcgatcgtttccggc
gatgccgaggctttctacgaacgcgagatcggcgagcgcgaaaagagtggcctgccgccc
ttcggccggctcgccgccgtcatcgtctcggccgaaacccgcgccgaggcggaggtccat
gcgcgcggcttgcgggcatcggcgcctcatgggcgaacgatctccgtactcggcccggca
gaggcgccgctggcgctggtgcgcggacgctaccggttccgtcttctggtgcatggtcgc
aggactgacgatattcaggcctatcttcgggccatgctcgaaaacggaccgaaacaacgc
ggttcggtgcgggttcagcttgacatcgacccgcaaagcttcctctaa
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