Methanobacterium formicicum BRM9: BRM9_0004
Help
Entry
BRM9_0004 CDS
T03396
Name
(GenBank) Hef nuclease
Organism
mfc
Methanobacterium formicicum BRM9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
DEAD
Helicase_C
ResIII
RNA_helicase_helical
HHH_5
HHH
HHH_2
SWI2_SNF2
HHH_3
Terminase_6N
5_3_exonuc
Kinase-PPPase
PhoH
DprA_N
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
AIS30838
UniProt:
A0A089ZFM9
LinkDB
All DBs
Position
complement(3295..5679)
Genome browser
AA seq
794 aa
AA seq
DB search
MKHQNETHPSRKPVRWIQHPLIEQGKIEARLYQQLLAADVIKKGNTMIVAPTALGKTVVA
ALVAADRLEKYPDSKILLLAPTKPLVIQHEESFREFLKSTVSSLTGAVKVEEREKRWYDS
QIIVATPQTIESDIIAGRYSLENVSLLIFDECHRGTGSYSYVFLAQRYNKQAKDPLILGL
TASPGGEEEKINQVCHNLFINEVVVKSEDDSDVKPYFNPIDVEWVRVDLKKEQLDIKKHL
DVALKNRLKGLKKMGVLSSIQQVTKKDVLRARGKVQNRLSQSNSPPRDCLLAISMLSAVL
SVLHSLELLETQGIGNLYAYFQRMTKKKTKAAQGLFKDENFKAAVNLTRQAQKKGVEHPK
LGKLMEILKDASEDQEQVIVFSQYRDTVNQIYDKCKEEGVNAVKFFGQASREKEKGLSQK
EQKEIIKAFRMRNYQVLISTSVAEEGIDIPSVDLVVLYEPVPSEIRMIQRRGRTGRTTKG
RMIVLITKNTRDESFYYSSMHRERRMKKQLANGYKQPEKPLIADDADVRMLDRKGEDLKS
RNSWGEDEKNLVVYVDHREAKSGVTRALSNMEATVKTVSLPVGDYQVSPHVAVERKSSKD
FVSSLIDKRIYKQAQELVENFPKPLIILEGGDLYSSGLHPNAIRGALASLTVDFNIPIIP
TRDPEDTAAMILRIASREVYKGSKDIQVRTEKKPLTLQEQQLFIVESLPNVGPVTARKLL
EAFDSVKGVFNASIDDLKRVSGVGDKTARNIRKIIESKYSDTFRFPSDSEDTRETSIITG
KNKPKMEYKLEKED
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcaaaatgagacccacccttcaagaaaaccggtccggtggatacaacaccct
ttaattgaacagggaaaaatcgaagcacgcctttaccagcaattactggctgcggatgtt
attaaaaagggaaacaccatgatagtggcccccactgccctgggaaaaactgtggttgcc
gccctggttgcagcagataggctggaaaaatatccagacagtaaaatcttacttttagca
cccaccaaacccctggtaatacagcacgaagaaagctttcgcgagtttttaaaatccacg
gtcagtagtttaaccggggccgtgaaggtagaagaacgggagaaaagatggtatgactcc
caaataattgtagccaccccccaaactatcgagtcagatataattgccgggagatactct
ttagagaatgtttcactccttatttttgatgaatgtcaccgtggaaccggatcctattct
tacgtgttcctggcccagcgctacaacaaacaggcgaaagatccgttaatacttggttta
actgcctcaccaggtggtgaagaagaaaaaataaatcaggtgtgccacaacctgttcatc
aacgaagtggtggttaaaagtgaggatgattccgatgtgaaaccctattttaaccccatt
gatgtggaatgggtaagggtagacttgaagaaggaacaattggacattaaaaaacatctg
gatgtggctctcaagaaccgtcttaagggcttaaagaaaatgggagtactgagctccatc
caacaggtcaccaagaaagatgttttgagggctagaggaaaggtgcagaacaggttgtct
cagagtaacagtccgccccgagattgtttgctggcaatatctatgcttagtgcggtttta
agtgttcttcactcgctggaacttttagaaacacaaggcataggtaatttgtatgcatac
ttccagagaatgaccaagaaaaaaaccaaagctgcccagggattattcaaggatgaaaat
ttcaaagctgccgttaatttaaccagacaggctcaaaagaaaggtgttgaacatcctaaa
ctgggaaaactaatggaaatccttaaggatgcttctgaagaccaggagcaagttattgtt
ttcagccagtaccgggacaccgtgaatcagatctacgataaatgtaaggaagaaggtgtt
aatgccgttaaattctttggacaggccagccgggagaaagagaagggcctaagtcagaag
gaacagaaggaaatcattaaagcgttccggatgaggaactatcaggttctgatttccacc
agtgtggctgaagagggaattgacatccccagcgtggacttggtggttctctacgaacca
gttccctcggagataagaatgatccagagacgtgggcgaaccggtaggaccaccaaagga
cgtatgatcgtgttaataaccaaaaacacccgggacgaatctttctattattcaagtatg
caccgtgaaaggagaatgaaaaaacagctggccaatggatacaaacagccagaaaaacca
ttaatcgccgatgatgcagacgttaggatgttagaccggaagggtgaggatttaaaatcc
aggaactcatggggagaagatgaaaagaacctggtggtttacgttgatcatagggaagcc
aagtcaggggttactcgagcattgagtaacatggaagcaacagtaaaaactgtaagtcta
cctgtaggagactatcaggtgagtccccatgtggccgtggaaagaaaaagtagtaaagac
tttgtaagctcattaattgacaaaaggatctataaacaggcccaggaactggtggaaaac
ttccccaaaccactgataatcctggagggaggggacctttacagcagtggattgcacccc
aacgctattcgaggagcattggccagtttgactgttgattttaacatacctattatcccc
actcgtgatcccgaggacactgcagccatgatccttagaattgcaagtagagaagtttac
aagggctccaaagacattcaggtgcgaactgaaaagaaaccacttacattgcaggaacag
caactttttattgtagagtcactgcccaatgtgggaccagtcactgcccgaaaattattg
gaggcctttgatagtgttaaaggtgtttttaacgcatcaattgatgatttaaagagagta
agtggtgttggtgataaaactgcccgcaatattcggaaaataattgaatctaagtattca
gataccttccgttttccatcagattctgaggataccagggaaacatccatcataactgga
aaaaacaagccaaaaatggagtataaactggaaaaagaggattaa
DBGET
integrated database retrieval system
