Methanocaldococcus fervens: Mefer_0598
Help
Entry
Mefer_0598 CDS
T00976
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfe03019
]
Mefer_0598
Messenger RNA biogenesis [BR:
mfe03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Mefer_0598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
Helicase_dom4_arc
DUF5905
Motif
Other DBs
NCBI-ProteinID:
ACV24419
UniProt:
C7P787
LinkDB
All DBs
Position
complement(566391..568814)
Genome browser
AA seq
807 aa
AA seq
DB search
MLIIRKPKKKKDEIEIVKVDEKIEDGVEVKNNQKIYANYKKIGDKYKLYRCRLGDKLIQP
SKVLELLKSDKIFILKENEEVEEILKSYNLKYNYIELCPFCLLKNIYKRLTRNNRCGYGN
LEICINCGINEIKEEVKISEEFIEKFLKRFKDVDKVLSLLRIRNPLDKPELTRYDVITGS
EEDKIENYKIDELDIPEELKEVIKSRGIKELLPVQTLSVKAGLLKGEDLLIVSATSSGKT
LIGELAGIKNLIETGKKFLFLVPLVALANQKYLEFKERYEKLGFKVSLRVGLGRIGKKVD
VNTSLDADIIVGTYEGIDYLIRTKRLKDVGTVVIDEIHSLNLEERGARLDGLIGRLRFLF
KDAQKIYLSATIGNPKELAKQLNAKLVLYNGRPVPLERHIIFCKNDFAKLNIIKEIVKRE
WQNISKFGYRGQCLIFTYSRKRAEHLAKALRAKGIKAEFYHGGMEYIRRRKVEDDFANQK
IQCVVTTAALSAGVDFPASTVILESLAMGGDWLNPAEFQQMCGRAGRKGMHEIGKVYLLV
EIGKKYHAKMENTEDEVAFKLLNAVPEDVVVEYSEDEEEEQILATISAGITNRFDIDSVP
YIGRAFSLNKILSNLESYNMIRANNEVKLTNYGKAVAISFLYPKVAEKIREGVVNNRELI
ELITEIMPFENVYLSNNLKIKLSKILNINVPSRFFDALEVIREGMEKIRDKKLKEDLTLI
IMEFEGVEPEEKILEMIINLRSLGKTPGQISKTLYEEFKIQTYSGDIYYYLEQLLNLLDA
IERISEIFNKKYAKKVKELKEKIENPK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcattaggaagcctaagaagaaaaaggatgaaattgagatagttaaagttgat
gaaaaaatagaggatggagttgaggtaaagaataatcaaaaaatatatgcaaattataaa
aaaattggtgataaatacaaattgtataggtgcaggttaggagataagttaattcagcct
tccaaggttttagaactgttaaaatctgataaaatattcatattaaaagagaatgaagag
gtagaggagattttaaaatcatacaatttaaaatacaattacatagagctctgcccattc
tgcttattaaaaaatatttataaaagattaacaaggaataacagatgtgggtatggaaat
ttagagatttgtataaattgtggaatcaatgaaattaaagaagaggtaaagattagtgag
gaatttatagaaaaatttttaaaaagatttaaagatgttgacaaagttctttcattgtta
aggataaggaatccgttggataagccagaattgacaagatacgatgttataactggtagt
gaagaggataaaattgagaattataaaattgatgagttggatattccagaagagcttaaa
gaggttataaaaagtagagggattaaagagcttctaccagttcaaacattatcagttaaa
gctggtttgttaaaaggagaagatttgctaattgtctcagcaacctcttcaggaaaaacg
ttgattggagagttagcaggaattaaaaatttaattgaaacaggaaaaaaatttctattt
ttagttcctttggtggctttagcaaaccaaaaatatttagaatttaaagaaagatatgaa
aaattgggttttaaggttagtttgagggttggattgggaaggattggaaaaaaggttgat
gtaaacacatctttagacgctgatattatagttggaacttacgaggggattgattattta
attaggactaaaaggttgaaagatgttggaacagtggttattgatgaaatccactcctta
aacttagaagaaagaggggcaaggttagatggtttaattgggaggttaaggtttttattt
aaagatgctcaaaaaatatatttgtcagcaacaattggaaatcctaaggaattggctaag
caattaaatgccaaattggttttatacaatggaagacctgttcctttagagaggcatata
atcttctgcaagaatgattttgcaaaattaaacatcattaaagaaattgtcaaaagagag
tggcaaaatatctcaaagtttggatacagggggcagtgcttaatctttacctactcaaga
aagagagctgagcatttagctaaagctttgagggctaagggtattaaagctgaattttat
catggtggcatggagtatataagaaggagaaaggttgaggatgattttgcaaatcaaaaa
atccaatgtgttgttacaaccgccgctttatctgcaggggttgattttccagcttcaact
gtcatcttagagagcttagccatgggaggagattggctgaatcctgcagaatttcagcag
atgtgtggaagggctggaagaaaggggatgcatgaaataggaaaggtttatcttttggta
gaaattggaaagaagtatcatgcaaagatggaaaatactgaagatgaggtagcttttaag
ctgttaaatgcagttcctgaggatgttgtagttgaatatagtgaagatgaagaggaagag
cagatattggcaacaatctcagctggaataaccaatagatttgacatagatagcgtgcca
tacattgggagagctttttctttgaacaagattttaagtaatttggaaagttataatatg
ataagagcaaataatgaggtgaaattaacaaattatggaaaggctgtagctatttccttc
ttatatccaaaggttgctgaaaaaattagggaaggagttgttaataatagagagcttatt
gaattaataacagagattatgccctttgaaaacgtctatttatcaaacaatttaaaaata
aagctttcaaaaattttaaatataaatgtcccttcaaggttttttgatgctttggaggtt
attagagaggggatggaaaaaattagagataagaagttaaaggaggatttaactttaatt
attatggaatttgagggagttgagccagaggaaaagattttagagatgattattaactta
agaagtttaggaaaaactcctggacagatttcaaaaacgttatatgaggagtttaagatt
caaacgtactctggagatatttattattacttagaacagttgttgaatcttttagatgca
attgagaggatttcagagatattcaacaaaaaatatgctaaaaaagttaaagagttaaaa
gaaaaaatagaaaatccaaagtaa
DBGET
integrated database retrieval system
