Marinomonas foliarum: JSY38_17590
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Entry
JSY38_17590 CDS
T07165
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
mfoi
Marinomonas foliarum
Brite
KEGG Orthology (KO) [BR:
mfoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfoi03400
]
JSY38_17590
DNA repair and recombination proteins [BR:
mfoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
JSY38_17590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DZR
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
AAA
zf-ribbon_3
AAA_16
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QRV23802
LinkDB
All DBs
Position
complement(3795288..3797045)
Genome browser
AA seq
585 aa
AA seq
DB search
MTQTFQLRDYQIQAVEASLGHFRNSDDPAVIVLPTGAGKSLVIAELSRLAKGRVICLAHV
KELVEQNHAKFLATGASAGIFSAGLSQKTSTEKTTFASIQSLSANLDNFNEPASLIIIDE
CHRVGMEESGQYNKTIEHFRALNPKVKILGLTATPYRLGSGWIYQNHYHGYTRSCTNSLF
KKCIFELPLQHMVKKGYLTPPIHYDAAIAHYDFSLLTESLDGEQNTDDIALNELIHKHPR
VTEAVTEQILQLSQDRQGVMIFAATIDHAREIASYLPADKTALITGKTKLKQRDSLITAF
KNKEIKYLVNVSVLTTGFDAPHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLVLDY
TNNGYNIFQPEIGEKRPTQDSVAVQIHCPACDFANTFWGRKDAEGNILEHFGRRCHGLVE
TEHGEEQCTYRFRFKRCPHCNEENDIAARQCQHCAEKLIDPDDLLRSALNLKNNKVLRCS
AITPEINSKEKTIKITYHDEDGLTLAETFRFNFKKSRQAFNDLFARRIANGSQSIEFDKL
EEVERFLPYLPAPDFVIAKKQKQHWQVTERLFDYQGPYRKANELS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacctttcaattacgagactaccaaattcaagccgttgaggcgtctttggga
cactttcgtaatagcgacgacccagccgtcattgtacttccaacaggtgcaggaaaaagc
ttagtaatagcagagcttagtcgattagccaaaggtcgagttatttgcctggcacacgtg
aaagaactggttgaacaaaaccacgcgaagttcttggcaaccggtgcatcggcgggaatt
ttctctgctgggctaagtcagaaaaccagcacagaaaaaaccactttcgccagcatacaa
tcgctatcggcaaaccttgataattttaacgaacccgcaagcttaatcatcattgatgaa
tgccatcgcgtcggcatggaagaaagtggccaatacaataaaaccatcgaacattttcga
gcactaaacccgaaggtaaaaatcctcggtttgaccgccacaccctatcgtttaggcagt
ggttggatctaccagaatcattaccatggctacacacgaagctgcaccaactcattattc
aagaaatgtatttttgagctgccactccaacacatggtgaaaaaaggctatttgacgcct
cctatacattacgatgcagcgattgctcattatgatttcagcctattaacagagagtttg
gacggcgagcaaaacaccgacgacatcgctttaaacgagctgattcataaacacccaaga
gtcactgaagccgttaccgagcaaatattacaacttagccaagatcgccaaggagtgatg
atttttgctgccaccattgatcatgccagagaaatcgccagttacttaccggcggataaa
accgcgctaataacaggtaaaaccaagctcaaacaacgcgattcattaatcactgcattt
aaaaataaagagatcaaatacttggttaacgtttccgtattaaccaccggatttgatgca
ccccatgtggacgtaatcgccatattacggccaacgcaatcaatcagtttgttccaacaa
attgtcggccgcggtttgcgcttaagcccaggaaaaaaagactgcttagtcttggattat
accaataatggctacaatatatttcaacctgagattggcgaaaagcgcccaactcaagat
tcagtggcagtgcaaattcattgccctgcatgcgactttgccaatacattctggggaaga
aaagacgccgaaggcaatatccttgagcattttggacgccgctgccatggtctagtggaa
accgaacacggagaagagcaatgcacgtatcgctttcgctttaaacgctgccctcattgc
aatgaagaaaatgacatcgctgcacgacaatgccaacattgtgccgaaaaactcattgat
ccagacgatttattaagaagcgcactcaatctaaaaaacaacaaagtcttacgctgctca
gcaattacgccggaaataaacagcaaagaaaaaaccattaagatcacctatcacgatgaa
gacggcttaacactggcggagacattccgttttaatttcaagaagtcccgacaagcattt
aacgacctatttgcacgaagaatcgccaatggcagtcaatctatagaatttgataaactg
gaagaagtagagcgttttttaccatatcttcctgcgcctgatttcgtcatcgcgaaaaag
caaaagcaacattggcaggtcactgaacgattattcgactaccaaggaccctaccgaaaa
gccaacgagcttagctaa
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