Mycoplasmopsis fermentans PG18: MBIO_0340
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Entry
MBIO_0340 CDS
T02594
Name
(GenBank) hypothetical protein
KO
K03702
excinuclease ABC subunit B
Organism
mfp
Mycoplasmopsis fermentans PG18
Pathway
mfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MBIO_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfp03400
]
MBIO_0340
DNA repair and recombination proteins [BR:
mfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MBIO_0340
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MBIO_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA
AAA_22
AAA_30
AAA_7
DPPIV_rep
CSN7a_helixI
Helicase_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
15167571
NCBI-ProteinID:
BAH69605
UniProt:
C4XEN3
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All DBs
Position
369166..371175
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AA seq
669 aa
AA seq
DB search
MSIFKLISPYKPAGDQPEAIKELVENIKDNMQHQVLKGVTGSGKTFTIANVIKEFDRPVL
VLSHNKTLASQLYSELKGFFPHNRVEYYVSYFDYYRPEAYIPSSDTYIDKQSQNNKDLDA
MRMSAMNAVLTRNDTIIVASVSAIYGALNPSEYYASVFPIEVGMQIKRQEFFKKLVQRNY
KRNQIDLELGTFSAKGDAVYIQPADSDEYQIRVDFFGDEIDSIATCDPITKEVIERFSHY
TIFPGDAYTVDRSVIDEACDKILVELDERIKYFKANNQLIEAQRIQERVEKDVDSLREFG
MCPGIENYARYMDRREAGERPYTLLDYFKGKKPLLFIDESHMMIPQLNGMYHGDYSRKKN
LVDYGFRLPSALDNRPLLFKEFENEFDFQTVYISATPDDYELDKTHGLLTKLFVRPTGLL
DPKIEIRLSKNQIEDIYDELQRQKDKNERTLILTTTKRLAEELSRYFLEKNEKIAYIHSE
HNTFERNEILRKLRKGVYDTVIGINLLREGVDLPEVSLIMVLDADKEGFMRSTKSLIQIS
GRAARNANGRVIFYADKTTKSMQECIEDNEIKRKMQIAYNKKHNITPKTIIKPIAEPIHG
EGIEGEIEFFFKNEKRNQTQSGKKAKEELIKRLREQMNQAAKELDYERAIELRDIILELQ
AGKDKKVEE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttaaattaatttcaccttataaacctgcaggtgatcaacctgaagcaatt
aaagaacttgtagaaaatattaaagacaatatgcaacatcaagtgcttaaaggagttact
ggtagtggtaaaacttttactattgcaaatgttattaaagaatttgatcgccctgtttta
gttttaagtcacaacaaaactttagcttctcaactttacagtgagttgaaaggtttcttt
cctcataatcgcgttgagtattatgtttcatattttgactactatcgacccgaagcttat
attccttcttcagatacttacattgataaacaatctcaaaataacaaagatttagatgct
atgagaatgtcagctatgaatgctgttttaactagaaatgacactattattgttgcttca
gtttcggcaatttatggtgcacttaatcctagtgaatattatgcttcagtttttcctatt
gaagtaggtatgcaaattaaaaggcaagaattctttaaaaaacttgttcaaagaaactat
aaaagaaaccaaattgatttagaattaggcacttttagcgccaaaggtgatgcagtttat
attcaaccagctgatagtgatgaatatcaaattcgagtcgatttttttggcgatgaaatt
gattcaattgcaacttgcgatcctattactaaagaagtaatagaacgttttagtcattac
acaattttccccggagatgcttatacagttgatagaagtgttattgatgaagcttgtgac
aaaatcttagttgaattagatgagagaattaaatattttaaagctaataaccaattaatt
gaagctcaaagaatccaagaaagagttgaaaaagatgtcgatagcttaagagaatttggt
atgtgtcctggtattgaaaactatgcaagatatatggatagaagagaagcaggcgagcgt
ccttataccttattagactattttaaaggcaaaaaaccacttttatttattgatgagagt
cacatgatgattccacaattaaatggaatgtatcatggtgactactcacgtaaaaaaaac
ttagttgattatggttttagattaccaagtgcactagataatagaccactgctttttaaa
gaatttgaaaatgaatttgattttcaaactgtttatatttcagctacccctgatgattat
gaacttgataaaactcatggtttattaaccaaattatttgttcgtcctactggtctttta
gatcctaaaattgaaattagactttctaaaaaccaaattgaagatatttatgatgaattg
caaagacaaaaagataaaaatgaaagaactttgattttaactacaactaaacgtttagct
gaagaattaagtagatactttttagaaaaaaatgaaaaaattgcttatatccactcagaa
cataatacttttgaacggaatgaaatcttaagaaaacttcgtaaaggcgtttacgacact
gttattggaattaacttattgcgtgaaggtgttgatttacctgaagtaagtttaattatg
gttttagatgctgataaagaaggctttatgcgttcgactaaaagcttaatccaaatttca
ggtcgggcagctagaaatgctaatggtcgagtaattttctatgcagataaaactactaaa
agtatgcaagagtgtattgaagataatgaaattaaaagaaagatgcagattgcttataat
aagaaacataatattacacctaaaaccattattaaaccaattgctgagccaattcatggc
gaaggaattgaaggcgaaattgaattctttttcaaaaacgaaaaacgaaatcaaactcaa
agtggcaagaaagctaaagaagaacttattaaaagattacgtgaacaaatgaatcaagca
gctaaagaattggactatgaaagagctattgaattgcgcgatattatcctagaattacaa
gctggtaaagataagaaagttgaggaataa
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