KEGG   Methanosarcina flavescens: AOB57_011735
Entry
AOB57_011735      CDS       T05666                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mfz  Methanosarcina flavescens
Pathway
mfz03030  DNA replication
mfz03410  Base excision repair
mfz03420  Nucleotide excision repair
mfz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOB57_011735
   03410 Base excision repair
    AOB57_011735
   03420 Nucleotide excision repair
    AOB57_011735
   03430 Mismatch repair
    AOB57_011735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfz03032]
    AOB57_011735
   03400 DNA repair and recombination proteins [BR:mfz03400]
    AOB57_011735
Enzymes [BR:mfz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AOB57_011735
    6.5.1.6  DNA ligase (ATP or NAD+)
     AOB57_011735
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AOB57_011735
DNA replication proteins [BR:mfz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AOB57_011735
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AOB57_011735
DNA repair and recombination proteins [BR:mfz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AOB57_011735
   NER (nucleotide excision repair)
    Other NER factors
     AOB57_011735
   MMR (mismatch excision repair)
    Other MMR factors
     AOB57_011735
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme VP40
Other DBs
NCBI-ProteinID: AYK15771
UniProt: A0A660HTT5
LinkDB
Position
2659531..2661237
AA seq 568 aa
MTSFREFSETCQAIEKISSTIDTTNRVADFLKKVDVEELPIATHFIMSEVFPAWSGEQLG
IGTSLLYAALSRASGMSVKSIESLLRTTGDIGDTALLILKEKRKNQVTFSSFFEEQPELS
ITEVYNRFKIASEASGKGSQDIKIKNLQFLFNSSTPREAKYISRLALEELRIGVGEGVVR
DAISKAFSVPVDVVEHAFMVTNDLGIVAATAKEGGIEALKRLGVEINRPIKMMLSQISPD
IVADIREMGEAAIEWKFDGARIQIHKAGNSVMLFSRKLENVTNSLPDLVEIIRKHVKAES
AILDGEAVAVDENGKPRAFQEILKRFRRKYNVEEKALGIPIQLNLFDIMYLNGKTLIDLP
LIERRKALESCVESSTEDSKSICVSKQVITGDLKLIEQIYKEALKAGHEGLMVKNPHSVY
SPGKRGKNWIKKKPLMETLDLVVVGAEWGFGRRANLIGSYTVACYDPETDRFLQVGKVGT
GLTDDQLKELTEMLSDLMEGVEAGGVFAVRPKIVLEIAFEEIQKSPNYNSGFALRFPRFI
RIRDDKDPEEADTIQRIEKVYSQQLKRL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgacaagcttcagggagttttcagaaacctgccaggcgattgaaaaaatctcaagtact
attgatactacaaatagggttgccgattttcttaaaaaggtcgatgtagaagagctgccc
attgcaactcattttattatgagtgaggtttttcctgcctggagtggagagcaattggga
atcgggacaagcctgctgtatgccgctctttccagagcttcgggaatgtctgtgaaaagc
atagaatctcttctacggactaccggagatatcggggacacagccctgcttatccttaag
gaaaaaaggaaaaatcaggttactttctcttctttcttcgaagaacaacccgaactctca
ataacagaggtctataaccgtttcaaaatcgcctcagaagcttcggggaaaggctcacag
gatatcaagataaaaaatcttcagtttctcttcaactcctcaacccccagggaagcgaaa
tatatctccaggcttgcccttgaggaactcaggatcggcgtcggtgaaggcgttgtaagg
gatgcgatttcaaaagctttctccgtgcctgtggatgtggtcgagcacgcctttatggtc
acaaacgacctcgggatagttgctgcaactgcaaaggaaggcggaatagaagcccttaaa
cgcctgggagttgaaatcaatcgcccgattaagatgatgctttcccagatcagtcctgat
atagttgccgacatcagggaaatgggggaggctgcaattgaatggaagttcgacggggca
agaatccagatccataaggctggaaattcggttatgcttttttcacgcaaactcgaaaat
gttacgaattcccttcccgaccttgtggaaataatccgcaagcacgtaaaagctgagtcg
gcaatccttgacggggaagccgtggccgtggacgaaaacggcaagcccagggcatttcaa
gaaattctcaagcgtttcaggcgcaagtacaatgtggaggaaaaagccctcggcatcccc
attcaactcaacctttttgacatcatgtacttaaacggaaaaaccctgatagacctgcct
ctcattgaaaggagaaaagcgcttgagtcctgtgttgaaagctcaactgaggactcaaaa
tcaatctgcgtgagcaaacaggtgataaccggagacctcaaacttatagaacagatctac
aaggaggctttaaaagccggacacgaaggtcttatggtcaaaaacccgcattcggtctat
tcgcctggcaaacgcggcaaaaactggattaagaaaaaacctcttatggaaaccctcgac
cttgtggttgtgggagcagaatggggctttggcaggcgtgcaaaccttataggctcttat
actgttgcctgttatgatccagaaaccgatcgttttctccaggttggcaaagtgggcacg
ggtctgactgacgatcagctaaaggagctcacagagatgctctctgacctcatggaaggc
gttgaggcaggcggagtatttgcagtacgcccaaaaatagtccttgaaatcgcatttgag
gaaatccagaaaagccccaattataactcaggctttgcactgcgtttcccgcgctttatc
cgcatacgggacgataaagacccggaagaagccgatacaatacagaggatagaaaaggta
tacagccagcagttgaaaaggctgtaa

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