Mycolicibacterium gadium: MGAD_33170
Help
Entry
MGAD_33170 CDS
T07053
Symbol
ligD_1
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mgad
Mycolicibacterium gadium
Pathway
mgad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MGAD_33170 (ligD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgad03400
]
MGAD_33170 (ligD_1)
Enzymes [BR:
mgad01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MGAD_33170 (ligD_1)
DNA repair and recombination proteins [BR:
mgad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MGAD_33170 (ligD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
Thr_synth_N
Big_4
Motif
Other DBs
NCBI-ProteinID:
BBZ18982
UniProt:
A0A7I7WPL1
LinkDB
All DBs
Position
complement(3353750..3356044)
Genome browser
AA seq
764 aa
AA seq
DB search
MVDQFGRVKLTNPDKVLYPATGTTKAEVFHYYVSVAEAMLPHIAGRAVTRKRWPNGVDEP
AFFEKQLASSAPDWLERGSITHKSGTTTYPIINSAEGLAWIAQQASLEVHVPQWRFVSTW
TREEGAEQTPGLATRVVFDLDPGEGVTFRQLCEVAHEVRELITGIGLTTFPLTSGSKGLH
LYVPLEKPISSHGASVLARRIAVQLEKTMPKRVTATMTKSLRSGKVFVDWSQNNGNKTTI
APYSLRGRGEPTVAAPRTWEEIEDPDLRHLRFDEVLERLERDGDLLAEMDADAPVADALS
TYRSMRDAGKTPEPVPNIAPTPGNDDFFVIQEHHARRLHYDFRLERNGVLVSWAVPKNLP
DSPAVNHLAVHTEDHPFEYGSFEGEIPRGEYGGGKVIIWDTGTYETEKFRDHSPDGPEKG
GEVIITLHGKKIDGRYALIQTNGKNWLAHRMKEQANPQASDLTPMLATEGSIAKMTKAQW
AFEGKWDGYRVLVDANHGRLNLRSRRGRDVTDEYPQFAAVAADLADHHVILDGEAVALDD
SGVPSFGEMQNRARSTRVEFWAFDILYLDGRSLLKAKYSDRRRVLEALAEGGGLIVPDLL
PGDGPEALEHARKKRWEGVVAKKRDATYQPGRRSSSWIKDKIWNTQEVVIGGWRKGEGGR
SSGIGALMLGIPADGGLQFVGRVGTGFTDKALKNLKGMLKPLETDESPFNTRLSKIDARG
VTFVRPELVGEVRYSERTSDDRLRQPSWRGLRADKEPSEVVWES
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtggtggatcagttcggtcgggtgaaactgaccaacccggacaaggtgctgtatcccgcc
acgggcaccaccaaagccgaggtcttccactactacgtcagcgttgccgaggcgatgctc
ccgcacatcgccggccgcgccgtcacccgtaagcgctggcccaacggcgtcgacgagccg
gcattcttcgaaaagcagctcgcctcttcggcgccggattggctggaacggggatcgatc
acccacaagtcgggcaccaccacgtatccgatcatcaacagcgccgaggggctggcgtgg
atcgcccagcaggcgtcgctggaagtgcacgtgccgcaatggcgattcgtcagcacctgg
accagagaggagggagccgagcagacgccgggcttggccacccgggtggttttcgacctc
gacccgggcgaaggtgtcacgttccggcagctgtgcgaggtggcgcacgaggtgcgtgag
ctcatcaccggcatcggactcacaacattcccgttgaccagcggcagcaaggggttgcat
ctgtacgtgccgctggaaaagccgatcagctcacacggcgcttcggtgcttgcccgccgc
atcgccgtgcagctcgagaagacgatgcccaagcgcgtgacggccaccatgaccaagagt
cttcgcagcgggaaggtgttcgtcgactggagccagaacaacggcaacaagacgaccatc
gcgccgtattcgctgcgcggtcgcggcgagccgaccgtcgccgcccctcgtacctgggaa
gagatcgaggatcccgatctgcggcacctccgattcgacgaggtgctcgagcggttggaa
cgtgacggtgacctgttggccgagatggacgccgacgctccggtggccgacgcgctcagc
acctatcgcagcatgcgcgacgccggcaagacacccgagccggtccccaacatcgcgccc
acgccgggcaacgacgacttcttcgtcatccaggagcaccacgcccgccgactgcactac
gacttccggctggagcgcaacggcgtcctcgtcagctgggcggtgccgaagaacctgccg
gacagccccgcggtcaaccacctcgccgtgcacaccgaggatcatccgttcgaatacggc
agcttcgagggtgaaatcccgaggggtgaatacggcggaggcaaggtgatcatctgggac
accggcacttacgagaccgagaaattccgcgaccactcgccggacggccctgaaaagggt
ggcgaagtcatcatcacgttgcacggcaagaagatcgacggccgctacgcgctgatccag
acaaacggcaagaactggctggcgcaccgcatgaaggagcaggccaatccgcaggcgagc
gatctgacaccgatgctcgcgaccgaaggttcgatcgcgaagatgaccaaggcgcagtgg
gctttcgagggcaaatgggacggctaccgtgtccttgtcgacgcgaatcacggtaggctc
aacctgcgatcacgacgagggcgtgacgtcaccgacgagtatccgcaattcgccgcggtg
gcagccgatctcgccgatcaccatgtgatcctcgatggtgaagcggtggctctcgacgac
tcgggcgtgccgagtttcggcgaaatgcagaaccgcgcgcgttcgacgcgggtcgagttc
tgggcgttcgacatcctctacctcgacggccgctcgctgctgaaggccaagtactccgac
cgccgccgcgtgctggaagcgctcgccgagggcggcggtctgatcgtgccggatctgttg
cccggcgacggccccgaggcgctggagcatgcgcgcaagaagcgttgggagggtgtggtc
gccaagaagcgcgacgctacctaccaaccgggacgacggtcgtcgtcgtggatcaaggac
aagatctggaacacgcaggaagtggtgatcggcggttggcgcaagggcgagggcggacga
tccagcggcatcggtgcgctgatgctgggcatcccggccgacggcggcctgcagttcgtc
ggccgagtcggcacggggttcaccgataaggcgctgaagaacctcaagggcatgctcaag
ccgctcgagaccgacgaatcacccttcaacacacgcctttccaagatcgacgcccggggc
gtcaccttcgttcggcccgaactggtcggcgaggtgcgctacagcgagcggacctccgac
gacagactgcgtcaaccgagctggcgggggctgcgtgccgacaaggaaccgtctgaagtc
gtctgggagtcgtag
DBGET
integrated database retrieval system
