Mycobacterium gallinarum: MGALJ_34300
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Entry
MGALJ_34300 CDS
T07342
Symbol
ligD_1
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mgau
Mycobacterium gallinarum
Pathway
mgau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MGALJ_34300 (ligD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgau03400
]
MGALJ_34300 (ligD_1)
Enzymes [BR:
mgau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MGALJ_34300 (ligD_1)
DNA repair and recombination proteins [BR:
mgau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MGALJ_34300 (ligD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Big_4
Thr_synth_N
Motif
Other DBs
NCBI-ProteinID:
BBY93761
UniProt:
A0A9W4FG79
LinkDB
All DBs
Position
complement(3505478..3507784)
Genome browser
AA seq
768 aa
AA seq
DB search
MVDQFGRVKLTNPDKVLYPATELRPKAVTKQEVFDYYVNVAEAMLPHIAGRAVTRKRWPN
GVNEPAFFEKQLASSAPDWLERGSISHKSGTTTYPIINSAEGLAWIAQQASLEVHVPQWR
FVSTWTREEGAEQTPGLATRVVFDLDPGDGVTFRQLCEVAHEVRELITGIGLTTFPLTSG
SKGLHLYVPLEKPISSHGASVLARRIAVQLEKTMPKRVTATMTKSQRSGKVFVDWSQNNG
NKTTIAPYSLRGRDEPTVAAPRTWDEIEDPDLRHLRFDEVLERLERDGDLLAEMDADAPV
ADALSTYRSMRDAGKTPEPVPNISPTPGNDDFFVIQEHHARRLHYDFRLERNGVLVSWAV
PKNLPDSPAVNHLAVHTEDHPFEYGSFEGEIPKGEYGGGKVIIWDTGTYETEKFRDHSPD
GPETGGEVIITLHGKKIDGRYALIQTNGKNWLAHRMKEQANPQASDLAPMLATEGSIAKM
TTAQWAFEGKWDGYRVLVDANHGKLNVRSRRGRDVTDEYPQFAALAADLADHHVILDGEA
VALDDSGVPSFGEMQNRARSTRVEYWAFDILYLDGRSLLKAKYSDRRRVLEALAEGGGLI
VPDLLPGDGPEALEFARKKRWEGVVAKKRDATYQPGRRSSSWVKDKIWNTQEVVIGGWRK
GEGGRSSGIGALMLGIPAEGGLQFVGRVGTGFTDKALKQLKDILKPLETDESPFNARLSK
IDARGVTFVRPELVGEVRYSERTSDGRLRQPSWRGLRTDKEPSDVVWE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtggtggatcagttcggtcgggtgaaactgaccaatccggacaaggtgctgtatcccgcc
acggagctgcggccgaaggccgtcacaaagcaagaggtcttcgactattacgtcaacgtg
gccgaggcgatgctcccgcacatcgcaggccgggccgtcacccgtaaacgctggcccaac
ggggtcaacgagccggcattcttcgaaaaacagctcgcgtcctcggcgccggactggctc
gaacggggatcgatcagccacaagtcaggcaccacgacgtatccgatcatcaacagcgcc
gaggggctggcgtggatcgcccagcaggcgtcgctggaagtgcacgtgccgcaatggcga
ttcgtcagtacctggaccagagaggaaggcgccgagcagacgccgggtctggccacccgg
gtggtcttcgacctggatccgggcgacggtgtcacgttccggcagctgtgcgaggtggcg
cacgaggtgcgtgagctcatcaccggcatcggactcacaacgttcccgttgaccagcggc
agcaaggggttgcatctgtacgtgccgctggagaagccgatcagctcacacggcgcttcg
gtgctcgcccgccgcatcgcggtgcagctggagaagacgatgcccaagcgcgtgacggcc
accatgaccaagagtcagcgcagcggcaaggtgttcgtcgactggagccagaacaacggc
aacaagacgaccatcgcgccgtactcactgcgcggtcgcgacgagcccaccgtcgccgcc
ccgcgtacctgggatgagatcgaggaccccgatctgcggcacctccgattcgacgaggtg
ctcgagcggttggaacgtgacggtgacctgttggccgagatggacgccgacgcaccggtg
gccgacgcgctaagcacctatcgcagcatgcgcgacgcgggcaagacacccgagccggta
cccaacatctcgcccacgccgggcaatgacgacttcttcgtgatccaggaacaccacgcc
cgccgactgcactacgacttccggctggagcgcaacggcgtcctcgtcagctgggcagtg
ccgaagaacctgccggacagccccgcggtcaaccacctcgccgtgcacaccgaggatcat
ccgttcgaatacggcagcttcgaaggtgaaatcccgaagggtgaatacggcggcggcaag
gtgatcatctgggacaccggcacttacgagaccgagaaattccgcgaccactcgccggac
ggccctgaaacgggcggcgaagtcatcatcacgttgcacggcaagaagatcgacggccgc
tacgcgctgatccagacaaacggcaagaactggctggcgcatcgcatgaaggagcaggcc
aacccgcaggccagcgatttggccccaatgctcgcgacagaaggctcgatcgcgaagatg
accacggcgcaatgggccttcgagggcaaatgggacggctaccgcgtcctggttgacgcc
aaccacggcaagctcaacgtgcggtcgcgccgagggcgtgacgtcacagacgagtatccg
caattcgccgcgctcgcagccgatctcgccgatcaccacgtgatcctcgatggtgaagcc
gtggctctcgacgactcgggcgtgccgagtttcggcgaaatgcagaaccgcgcgcgttcg
acgcgggtcgagtactgggcgtttgacatcctctacctcgacggtcgctcgctgctcaag
gccaagtactccgaccgccgccgcgtgctggaagcgctcgccgagggcggtggtctgatc
gtgccggatctgttgcccggcgacggccccgaggcgctggagttcgcacgcaagaagcgt
tgggagggtgtggtcgccaagaagcgcgacgctacctatcaaccgggacgacggtcgtcg
tcgtgggtcaaggacaagatctggaacacccaggaagtggtgatcggcggctggcgcaag
ggcgagggcggacgctccagcggcatcggcgcattgatgctgggcatcccggccgagggc
ggcctgcagttcgtcggccgggtcggcacagggttcaccgacaaggcgctgaagcaactc
aaggacatactcaagccgctcgagacggacgaatcacccttcaacgcacgcctttccaag
atcgacgcccgcggcgtcaccttcgttcggccggaactggtcggcgaggtgcgctacagc
gagcggacctccgacggcagactgcggcaaccgagctggcgagggctgcgtaccgacaag
gaaccgtctgacgtcgtctgggagtag
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integrated database retrieval system
