Megalopta genalis: 117220970
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Entry
117220970 CDS
T07400
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
mgen
Megalopta genalis
Pathway
mgen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117220970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgen03041
]
117220970
Enzymes [BR:
mgen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117220970
Spliceosome [BR:
mgen03041
]
Complex C
Other components
Step II factors
117220970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
ABC_tran
PhoH
ResIII
AAA_16
Sigma54_activ_2
T2SSE
AAA_24
Sigma54_activat
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
117220970
NCBI-ProteinID:
XP_033327375
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MDSSNDSSLYRLEGTDKSQGGGLIIRKKPSDHTFKKPQMSVLGLDKLAKRKRQENAQESN
STRSHSPDSEVKERKYRSYAEETPTHTGGVNSEAQRRLESRLKHQRLSAQDKHHRHHREH
SRDSDSRRRDRSRDRDRDRDRDREREKSRSRGSVRQTPLRFKDEPQTPVFKTKDPTSRSN
WDDDEDEEPRKSSWDHPTPNLYSNRDSRESTRSEFTPSYKYNSWNKDKASGATPMVDGEE
KELWEEEQQRLDREWYALDDGENHAFADVSEEYTRKKEMELEAKRQKRLSAQQRQINKDN
ELWERNRMLTSGVVSSLDHDDDPDDEGETRVHLLVHNVVPPFLDGRIVFTKQPEPVVPVR
DPTSDMALVARKGSALVRAYREQKERRRAQKKHWELAGTHIGNIMGVRDRNKEDKEEPGQ
EHDFKAGQKYARHIGADEVTGEAKYRTIQHQRRSLPVFAVRQELLNVIRENSVVVIIGET
GSGKTTQLTQYLHEDGYSRNGIIGCTQPRRVAAMSVAKRVSDEMATSLGDKVGYAIRFED
CTSKDTVIKYMTDGILLRESLREGDLDRYSVIIMDEAHERSLSTDVLFGLLREVVARRHD
LKLIVTSATMDSSKFSAFFGNAATFQIPGRTFPVEILHAKNAVDDYVDAAVKQVLQIHLQ
PRSGDVLVFMPGQEDIEVTCEALKERLAEIESAPLLSILPIYSQLPSDLQAKIFQRSEGG
LRKCVVATNIAETSLTVDGIVFVVDSGYCKLKVYNPRIGMDALQVYPVSRANADQRAGRA
GRTGPGTCFRLYTRRQYLDELLLTGVPEIQRTNLANTVLLLKSLGVQDLLAFHFMDPPPQ
DNILNSLYQLWILGALDHTGRLTPLGRQMAEFPLDPPQCQMLIVASQLGCTADILIIVSM
LSVPSIFYRPKGREEDSDSAREKFQVPESDHLTYLNVYNQWKTNGYSSSWCNDHFIHAKA
MRKVREVRQQLEEILKQQKMEVVSCGTDWDIVRKCICSAYFHQAARLKGIGEYVNCRTGM
PCHLHPTSALFGMGFTPDYVVYHELVMTAKEYMQCVTAVDGHWLAELGPMFFSVKETGRS
GRAKRRKAMQHLHEMEGQMKEAEEEMKARAQEQLEREQASIRKKEILTPGIREPGTPAPY
RKTPGRLGL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggatagctcaaacgattcaagcttatataggttagaaggtactgacaaaagtcaaggt
ggaggtttaattatccgcaaaaagccttctgatcacacatttaagaagcctcagatgtct
gttctgggtcttgataagcttgcaaaacgaaaaagacaagaaaatgcacaagagtcgaat
tcgacaagatcacactcaccggattcagaggttaaagaaagaaaatacagatcatatgct
gaggaaacaccaacccatactggtggagtaaattctgaagcacaaagaagattagaatct
cgactgaaacatcagagactaagtgctcaggacaagcatcacaggcatcatagagagcat
agtagagacagcgattctcgaagaagagacagaagtagagatagggacagagatagagat
agggatagagaaagagagaagagtagaagcagaggcagtgttagacaaacgcctttgaga
ttcaaagatgaaccgcagacgccagtatttaaaacaaaagatccaacatccagaagtaat
tgggacgatgatgaagatgaagaaccaagaaagtcaagttgggatcatccaacaccgaat
ctttatagcaacagagacagccgtgaaagtactagaagtgaattcactccttcgtataaa
tataattcttggaataaagataaagccagtggtgctactcccatggtagacggagaagaa
aaagagttgtgggaagaagaacaacagagattggacagggaatggtatgccttagatgat
ggagagaaccatgcatttgctgacgtgtccgaggagtatacacgtaaaaaggaaatggaa
ctcgaggcaaaaagacaaaaacgtctctctgcgcaacaaaggcaaataaataaggataat
gaattgtgggagcgtaatagaatgttaacatctggagttgtaagttcattagaccatgat
gacgatcctgatgatgagggtgaaactagagtgcacctcttggttcacaatgttgtccca
ccatttttagatggtcgaattgtattcactaaacagcctgaacctgtagtacctgtacgt
gatcccacttctgatatggctcttgttgcaaggaaaggttcagcattagtacgggcatac
cgtgaacagaaagagcggcgtagagctcagaaaaaacattgggagctagctggaactcat
attggaaacattatgggtgttcgtgataggaataaagaagacaaagaagaaccaggacaa
gagcacgattttaaagctggtcagaaatacgctcgccacataggagctgatgaagttaca
ggagaagctaaatacagaactattcaacatcaaaggagaagcctacctgtgtttgcggta
cgccaagaactgttaaacgttattagagaaaacagtgttgtagttataattggagaaact
ggtagtggaaaaacaacacaattaacacaatatctccatgaagatggatatagccgtaat
ggaataattgggtgcacgcaacctagaagagtagcagctatgtctgtagctaaaagagtt
tctgatgagatggctactagcttaggagataaagttggctatgctattcgttttgaagat
tgtacttcaaaagatactgttattaagtatatgactgatggtattttattgagagaaagt
ttaagagaaggagacttggatcgatatagtgtcatcattatggacgaagctcacgagaga
tctttatctaccgatgtgttatttggtttgctcagagaagttgtagctaggaggcacgat
ttaaaattaatcgtaacatccgctactatggattccagtaaattctcggcgtttttcgga
aatgctgcgacgtttcaaattccaggtcgcacattcccagtagaaatattacacgcaaag
aacgcagtagatgactatgtagatgctgctgtaaaacaggtgttgcaaatacatttacaa
ccacgttctggcgatgtattggtattcatgcctggtcaagaagacattgaagtcacctgt
gaagcgttgaaagagcgattagccgaaatcgaatcagctccactactttctattctacca
atctattcacaattaccctcagacttgcaggctaagatctttcagcgttctgaaggaggt
ctgcgaaaatgtgttgtggctaccaatatcgcagaaacttcgttgaccgtagacggtatt
gtattcgtcgttgattctggatactgcaagctaaaggtttacaatccacgaattggtatg
gatgctttacaagtgtatcctgtgtctagagctaacgctgatcaacgagctggaagagca
ggacgtactggtcctggcacatgttttagattatacaccagaaggcaatacttagacgag
ttacttctaactggagtcccagaaatacagcgaaccaatcttgctaacactgtgttactg
ttgaaatctttgggtgtgcaggatttattagcgtttcatttcatggatcctcctcctcaa
gacaatatattgaattcgttgtatcagctatggatcttgggcgctttggatcacacagga
cgtcttacgcctttaggacgtcaaatggcagagtttcctttggaccctccccagtgccaa
atgttaatagtggcttcccaactgggatgtactgctgacatacttatcatagtttcaatg
ttatcagtgccgtcgatattctatagacccaaagggcgcgaggaggattctgattcagcg
agggagaagttccaagtaccagaatccgatcatttgacgtacttaaacgtatacaatcag
tggaaaacaaatggctattcgagttcatggtgtaacgaccatttcattcatgcgaaagcc
atgcgtaaagtaagagaagtgcgacagcaacttgaagagattctaaagcagcagaaaatg
gaggttgtgagctgtggcacagactgggatatcgttcggaagtgcatttgttcggcatat
ttccaccaagcagccagactgaagggtattggcgaatacgttaattgccgtaccggaatg
ccatgccatctccatccaacttccgctttgtttggtatgggattcacaccggattatgtg
gtgtaccatgagcttgttatgacggctaaagagtacatgcagtgtgtcactgccgttgac
ggacactggcttgccgagttaggtcctatgttcttcagcgtgaaggaaactggaagaagc
ggacgagcgaagagacgaaaagcgatgcagcatttgcatgaaatggaaggacaaatgaag
gaagcagaggaggagatgaaagctagagctcaggaacaactggaacgtgagcaggcttct
atcagaaaaaaagaaatattaacacctggtatcagggagccaggaactccagcaccttac
cgtaaaactccaggcagattaggattgtaa
DBGET
integrated database retrieval system
