Megalopta genalis: 117222774
Help
Entry
117222774 CDS
T07400
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mgen
Megalopta genalis
Pathway
mgen03022
Basal transcription factors
mgen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117222774
09124 Replication and repair
03420 Nucleotide excision repair
117222774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgen03021
]
117222774
03400 DNA repair and recombination proteins [BR:
mgen03400
]
117222774
Transcription machinery [BR:
mgen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117222774
DNA repair and recombination proteins [BR:
mgen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117222774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
117222774
NCBI-ProteinID:
XP_033330574
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPTGLQSKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVLILNELNVWKEVSIPGGLPGWILNATFKKNL
KIVLLGGGKPWTMSNQMETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITATQIVGYLQQHAHSKMIEAGPPVLPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacgataaccgggaagaatctgttacgacccaccggattgcaatctaaaaat
cttcaagaatatttaaaatcacgacctccggaagtattgaataaactctatcacaatcct
ccaatttgtttagctgtttttcgtgaattgcccgtaatagctaagcattatgttatgcga
ttattatttgtcgaacaaccagtacctcaagcagtcattgcgtcttggtgttctaaactt
tactttgaggaacatcaaaaggtagtgttgatattaaatgaattaaatgtgtggaaggaa
gtttccataccaggaggattacctgggtggattctaaatgctacatttaagaaaaaccta
aaaattgttttactgggaggtggtaaaccatggaccatgtcaaaccaaatggaaactgat
agtaaaccaagagatgtagcatttttagattcatatgcattagaaagatgggaatgtgtc
ttgcattatatggttggttcacaacaacaagaaggtatctccgctgatgctgtcagaata
cttttgcatgctggattaatgaaacgagatgaagctgatggaagtccagttatcacacaa
gctggatttcaatttttgttattagaaactgcatcacaggtgtggtactttattttacaa
tatctagacacaatagaagcaagaggtctcgatttagttgaatgccttacatttctcttt
caattaaatttttcaacacttggtaaggattatagtacagaaggaatgtctgagggttta
ctaacatttttacaacatttacgcgaatttggcctagtttatcaaaggaaacgaaaagcc
ggaagattttatcctactcgattagcattaaatattgctaccggacaaaacaaaccatta
tctagagatccagaaaaagaaggatacattgttgttgaaacgaattacagagtatatgct
tatacaaattcaaatttacaagttgccttacttggtctgttttgtgaaatgttgtacagg
tttccaaatttggtcgtatcaatattaacaagagattctgttcgtcaagccctaaaaagt
ggtatcactgcaactcaaattgtaggttatttgcagcaacatgctcacagtaaaatgata
gaggcaggtcctccagttttaccccctacaattgtagatcaaattaaattgtgggaaaat
gaaaggaacaggtttatatttagcgaaggcgttttgtatagtcaatttctttctcagacc
gattttgaagtacttagagatcatgccctttctaccggagtattaatttggcaaagtgaa
agaaaaagaaccatggtagttacaaaggcaggacatgacgatgtgaaaaaattttggaaa
cggtattctaaaggttccagttag
DBGET
integrated database retrieval system
