Marinobacterium iners: CFI10_13300
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Entry
CFI10_13300 CDS
T07136
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mgeo
Marinobacterium iners
Pathway
mgeo03030
DNA replication
mgeo03430
Mismatch repair
mgeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFI10_13300
03430 Mismatch repair
CFI10_13300
03440 Homologous recombination
CFI10_13300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgeo03032
]
CFI10_13300
03400 DNA repair and recombination proteins [BR:
mgeo03400
]
CFI10_13300
Enzymes [BR:
mgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFI10_13300
DNA replication proteins [BR:
mgeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFI10_13300
DNA repair and recombination proteins [BR:
mgeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFI10_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
AAA_16
RuvB_N
ResIII
AAA_5
AAA_14
AAA_30
AAA_2
TniB
PIF1
AAA_19
AAA_18
AAA_7
DUF3646
TsaE
AAA_assoc_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QSR35958
LinkDB
All DBs
Position
complement(2782984..2784855)
Genome browser
AA seq
623 aa
AA seq
DB search
MSYQVLARKWRPRRFKEMVGQEHVLKALVNALDDDRLHHAYLFTGTRGVGKTSIARLFAK
SLNCEQGISSEPCGVCSACVEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYSPTHGRF
KVYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPMTVLSRCLQFNLKNLTA
ERIQNHLGFVLGEEGIESESAALWLLARSADGSMRDALSLTDQAIAFGAGSVREADVRTM
LGTIDQRLVYRMLEQIARQQPAQVLEAVRELSEFSPDYLTVLGDMVSLLHRIALAQVMPA
AVDNSLGDREQVLELARLLRPEEVQLYYQVALMGRKDMPLVPEPREGLEMTLLRMLAFRP
AGSEPLQGLSPTEAKGADPVSESAAAVAAAPAATEAVAPMAAAEPSQQSNAQAPAEPPSA
PMPEDIPPWDDLPPDLAENSPKKSDPAEVDARPEPASISTAQAEPMAPVRTPTPEPPTPM
PEALPVLAASDYVAGNGDWCDLLPQLGLSGMVESLARNLSLELGDSSRMLFHYTPEQDAL
LNEDRRERIRTAIRAVRGEQVQIEFTQAVQTVETPAQRIERLRAERQAEAVQAIEADPLV
QTLIEQFGARIETESVRPLDPEH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcacgaaaatggcgccccagacgtttcaaggaaatggttggc
caggaacatgttctgaaagcgctggtcaatgcgctggatgatgaccggctacaccatgcc
tacctgtttaccggtactcgtggggtgggtaaaacctccatcgcgcgcctgtttgccaaa
tcgctcaactgcgaacagggcatctcctccgaaccttgcggcgtatgcagtgcttgtgtc
gagattgccgagggtcggttcgttgatctgattgaggtggacgcggcctcgcgcaccaaa
gttgaagatacgcgcgaactgctcgaaaacgtgcagtactcaccaacacatggtcggttc
aaggtgtacttgatcgacgaggtgcacatgctgtccaacagctcgttcaatgcgctgttg
aaaacgctggaagagccgccgccgcatgtgaagtttctgctggcgactaccgatccacaa
aagctgccgatgacggtgctgtcgcgttgcctccagttcaatcttaaaaacctcactgcc
gagcgtattcaaaaccaccttggttttgtgctgggagaagagggcattgagtctgaaagt
gcagcgctctggctgctggcacgttcggctgatggttccatgcgtgatgcgctcagcctg
accgatcaggcgattgcctttggtgccggcagcgtacgcgaagcagatgtgcgcaccatg
ctgggcaccattgaccaacgtctggtgtaccggatgcttgagcagattgcgcggcagcag
ccggcacaggtgctggaggcagtgcgtgaactgtcagaattttcgcctgattacctgacg
gtgctgggggatatggtcagcctgctgcatcgcattgcactggcgcaggtgatgccggcc
gcggtggataatagcctgggtgatcgtgagcaggtactggaactggcacgcctgctgcgc
ccggaagaggttcagctgtattatcaggttgctctgatggggcgcaaggatatgcctttg
gtacctgagccacgagaagggctcgaaatgacgctgctgcgtatgctggcgttccgaccg
gccggcagcgagccgctgcaggggctcagcccgactgaggcgaagggagctgatcctgtg
tcggaatctgccgctgccgtggcagctgcgcctgcagccaccgaagctgttgcgccgatg
gccgctgctgagcccagccaacagtcgaacgcgcaggcacccgctgagccgccgtctgca
ccgatgccagaggacattcctccgtgggatgacctgccgccggatctggccgagaactcg
ccaaaaaagtctgacccggctgaggtggatgcccggccggagcctgcctcgataagtacc
gcacaagcggaaccgatggctccggtgcggactccaactccagagccaccgactccgatg
cctgaggccttgcccgtgctggctgcctcagattacgttgcaggcaatggtgactggtgt
gatctgctgccgcagctggggcttagtggcatggtggaaagcctggcgcgcaatctgtcg
ctggagttgggcgactccagtcgcatgttgttccactacacgcctgagcaggatgcattg
cttaacgaggatcgccgagagcgtattcgaaccgcgatcagagcggttcggggcgaacag
gttcagattgagtttacgcaggcggtgcaaacagtcgaaaccccggctcagcgtatcgag
cgcctgcgtgccgaacgtcaggcagaagcggtgcaggcaattgaggccgacccgttggta
caaacgttgatcgaacaatttggcgcacggatcgaaaccgagtcggtccgcccgctggac
ccggaacactga
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