Micropruina glycogenica: MPLG2_2831
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Entry
MPLG2_2831 CDS
T05338
Symbol
ligD
Name
(GenBank) Multifunctional non-homologous end joining DNA repair protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mgg
Micropruina glycogenica
Pathway
mgg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MPLG2_2831 (ligD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgg03400
]
MPLG2_2831 (ligD)
Enzymes [BR:
mgg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MPLG2_2831 (ligD)
DNA repair and recombination proteins [BR:
mgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MPLG2_2831 (ligD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
LigD_N
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
SPD87861
UniProt:
A0A2N9JJX0
LinkDB
All DBs
Position
1:complement(2773577..2776048)
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AA seq
823 aa
AA seq
DB search
MSPADQHLDVDGRLIKVTNLDKVLYPETGTTKGDVIAYYQAVAPYFVPHAAHRPATRKRW
PNGVGTPEQPQTPFFHKNLDPKSTPDWVRTFTIEHSEGDNVYPLIDDAATLVWLAQLAAL
ELHVPQWTVLDGERQPPNRLVIDLDPGAGAGIEQCVEVAQLLREVLDQVGFASVPVTSGS
KGIHLYAALGGEMTSDEVSAWAHELALTLEAMRPDLVVSDMNKKLREGRVLLDWSQNNAA
KTTIAPYSLRGRAHPTVAAPRTWDELGPGLRQLEFDEVLERLASMGDPFAAIEFPPVELV
ESPPVELVETPDRLTTYRSMRDPAKTPEPVPADRPEPRPLGNSFVIQEHHARRLHYDFRL
EHDGVLVSWAIPKGPPTDPAVNHLAVQTEDHPLEYGSFEGDIPRGEYGGGHVDIWDAGTF
ELEKWRDGKEVIATLTGRPDGGLGGVPRRFALLHTKMGGDEKNWLIHLMAPADDKSSSRP
APSSSRRTPGSPSSTTTPTESSPAVERDETASAEAPTIAPMLATAGVAQDVQHGDWVFEV
KWDGYRALATVNDGAVRLASRRGHDLTKDFPELAELARLIAPHDAVLDGEVVFLDPDGRP
SFERLQNRAEHRGEAHYMVFDLLRLDGRSQLHEPYTARREQLAALLGDGTRRIQLSTQLG
TDADEALAISRELGLEGVVAKRPDSVYQPGRRVDTWIKIKHLLAQEVVIIGWTPGESARA
RTIGALLMAVPNGDALTYVGRVGSGFTEKDLADTKLVLSEIEVAATTVPDIPAADRKGAH
WVEPILVGEVTYGVWTQAGRLRMPVWRGWRPDKTPDDISLPEQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggccgatcagcacctcgacgtcgacggtcgcctgatcaaggtgaccaacctc
gacaaggtgctgtaccccgagacgggcaccaccaagggcgacgtgatcgcgtactaccag
gccgtcgcgccgtacttcgtgccgcacgcggcgcatcgcccggccactcgcaagcgctgg
cccaacggcgtcggcacccctgagcagccgcagacgccgttctttcacaagaacctcgac
cccaagtcgacgcccgactgggtacgcacgttcaccatcgagcactccgagggcgacaac
gtctacccgctgatcgacgacgccgcgaccctggtgtggctggcgcagttggccgcgctc
gaactgcacgtgccgcagtggacggtgctcgacggcgaacggcaaccccccaaccggctg
gtgatcgacctcgacccgggggcgggagcgggcatcgagcagtgcgtcgaggtggcgcag
ttgctgcgcgaggtgctcgatcaggtcgggttcgcctcggtgccggtcaccagcggcagc
aagggcattcacctctacgccgcgctcggcggcgagatgacgtccgacgaggtgtcggcg
tgggcgcacgagctggccctcacgttggaggcgatgcgccccgacctggtggtcagcgac
atgaacaagaagctgcgcgagggtcgggtgctgctcgactggagccagaacaacgccgca
aagaccaccatcgccccctactcgctgcgggggcgcgcgcacccgaccgtggcggccccg
cgcacctgggacgagctggggccgggactgcggcaactggagttcgacgaggtgctggag
cggctcgcatccatgggcgaccccttcgcggcgatcgagttcccgccggtcgagctcgtc
gagtccccgccggtcgagctcgtcgagacccccgaccgcctcaccacctaccgctcgatg
cgcgacccggccaagacccccgaaccggtgccagcggaccgtccggaacctcgtccacta
ggcaattcgttcgtgattcaagagcaccacgcccgccggctgcactacgacttcaggctc
gaacacgacggggtactggtgtcgtgggccatacccaaaggcccaccgaccgacccggcg
gtgaaccatctggcggtgcagaccgaagaccacccgctcgagtacggcagcttcgagggc
gatattccgcgcggcgagtacggcggcgggcacgttgacatctgggacgccggcaccttc
gagctcgagaagtggcgcgacggcaaagaggtgatcgccaccctgaccggacgccccgac
ggcggcttgggcggcgtgccccggcggttcgcgctgctgcacacgaagatgggcggcgac
gagaagaactggctgattcacctgatggcgccggccgatgacaaatcgtcatcccggccc
gccccttcgtcatcccggcgaacgccgggatctccaagctcgaccacgacgccaaccgag
tcgtccccggcggtcgagcgtgacgagaccgcctccgccgaggcccccaccatcgccccc
atgctcgccacggccggcgtcgcgcaagacgtccaacacggcgactgggtgttcgaggtc
aagtgggacggctaccgggctctggctacggtgaacgacggcgcggtgcgactcgccagc
aggcggggccacgacctcaccaaggacttccccgaactcgccgaactcgcccgcctgatc
gctccgcacgacgccgtgctcgacggcgaggtggtgtttctcgacccggacggacggccg
agtttcgagcggctgcagaaccgggccgaacaccgcggcgaggcgcactacatggtgttc
gacctgcttcggctcgacggacgctcgcagctgcacgagccctacaccgccaggcgtgag
caactggccgcactgctcggcgacggcacccgccgcattcaactcagcacccagctcggc
accgacgccgacgaggccctggcgatcagtcgcgaactgggcctcgaaggcgtggtggcc
aagcggcccgacagcgtctatcagccgggccgccgggtggacacctggatcaagatcaag
cacctgctcgcccaagaggtggtgatcatcggctggacgcccggcgagagcgcccgcgcc
cgcaccatcggtgcgctgctgatggcggtgcctaacggcgacgcgctcacctacgtcgga
cgagtcgggtcaggcttcaccgagaaggacctggccgacaccaagctggtgctgtcagag
atcgaggtggctgcgacgacggtgcccgacattccggcggccgatcgcaagggcgcccac
tgggtcgagccgattctggtcggcgaggtcacctacggggtctggacgcaggcgggccgg
ctgcgcatgccggtgtggcgcgggtggcgtccggacaagaccccggacgacatcagcctg
cccgagcagtga
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