Micropruina glycogenica: MPLG2_3900
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Entry
MPLG2_3900 CDS
T05338
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mgg
Micropruina glycogenica
Pathway
mgg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPLG2_3900 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgg03400
]
MPLG2_3900 (mfd)
Enzymes [BR:
mgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPLG2_3900 (mfd)
DNA repair and recombination proteins [BR:
mgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MPLG2_3900 (mfd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
CarD_TRCF_RID
Helicase_C
ResIII
AroM
MFD_D3
RecG_dom3_C
UB2H
Motif
Other DBs
NCBI-ProteinID:
SPD88930
UniProt:
A0A2N9JLL0
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All DBs
Position
1:3793718..3797293
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AA seq
1191 aa
AA seq
DB search
MTLSGLVDLVAADPTIAPSVDDARRGLLRALDLTAPEALRPVLVAALAAGSGRPALLITS
TYREAEATTAALASLLGDERVAYYPAWETLPHERLSPRSDTVGRRLQVLRRLAGNDELPA
PDVIVAPVRSVLQPQVRGLGDLLPVTLRVGAEHDLSDLARALVNAAYTRVDLVERRGEFA
VRGGILDVFPPTEEHPVRVDFFGDEIDEIRAFAVADQRSFGDPITEVVASPCRELLITDE
VKARAAALADATSTIQGNLTEMLDKIAQGHAVDGMEALSAALVDGLELLIDVVPANTLVL
VSDPDRVRARAHELVQTSQEFLQASWVAAAEGGKAPIDLAAGAYRELADVRQHALGRGQA
WWSLSPWAAAPEAVAPVDDWDDPIDLGIGESDLAGVESRTVAAREGEVFRGDAQAGVEAV
RASVAANSRVVLVADSPGLATRMGEVLTEAGVPARGALDLAQPPEPGLATITVAELRHGF
TLPGVELTLYTAADLAGQREVDKSARKMPARRKNTIDPLELEAGDPVVHETHGVGRYVEM
VQRTVQGATREYLVVEYAPSKRGQPGDRLFVPMDQLHLITRYVGGENPTLDKMGGADWNK
RKSRARKAVREIAAELIKLYAARQASQGYAFGADTPWQRELEDAFSYVETPDQLAAITEV
KADMQQVIPMDRLICGDVGYGKTEIAVRAAFKAVMDGKQVAVLVPTTLLVQQHHATFADR
YAGFPVTVAPLSRFQTPAEAKKTAEGIADGSVDVVVGTHRLLGNEVQFKDLGLVIVDEEQ
RFGVEHKEALKKLRLNVDVLSMSATPIPRTLEMAITGIREMSVIATPPEERHPVLTFAGP
WDEAQVRAAIRRELAREGQVFYIHNRVNSIEKTAKRLAELVPEARVAVAHGQMNEHALEQ
VMVDFWERRADVLVCTTIVEAGLDISTANTLLIERADLLGLSQLHQLRGRVGRGRERGYA
YFLYPPEKPLTETAHDRLATMAAHTDLGAGMAIAMKDLEIRGAGNLLGGEQSGHIAEVGF
DLYIRLVGEAVADFRGEDVEPEPEMKIELPVEAHLPVDYVESERLRLEMYKRLAQVSDEV
GIEAVRDELHDRYGPLPEPAEALLAVARFRLLARTKGITEIIMAGTSVRFSPADLPDSKQ
LRLTRLYPGSQVRKTAGHVLIPRPMTRPIAGQPIVDLPLLQWATTVLDDIF
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
gtgactttgtcgggactggttgatctcgtcgccgccgaccccaccatcgcaccgtccgtc
gacgatgcgcggcggggtctgctgcgcgccctcgacctgaccgcgcccgaggccctgcgg
cccgtgctggtggccgcactcgccgccggttctggacgccccgcactgctgatcacctcc
acctaccgcgaggccgaggccaccacggcggccctcgcctcactgctcggcgacgagcgg
gtcgcctactacccggcctgggagacgttgccccacgagcggctcagcccacgctccgac
accgtcggacggcggctgcaggtgctgcgccggctggccggcaacgacgaactgccggct
ccggacgtgatcgtggccccggttcgctcggtgctgcagccccaggtaaggggcctgggc
gacctgctgccggtcacgctgcgggtgggggccgagcatgacctgtccgacctggcccgg
gccctggtcaacgcggcctacacgcgcgtcgacctggtcgaacgacgcggcgagttcgcc
gtgcgcggcggtattctcgacgtctttccgccgaccgaagagcacccggtgcgggtcgac
ttcttcggcgacgagatcgacgagatccgcgcgttcgccgtggccgaccagcggtcgttc
ggcgacccgatcaccgaggtggtcgcctcaccctgccgcgaactgctgatcaccgacgag
gtcaaggcccgcgcggccgccctggccgatgccaccagcaccattcagggcaacctcacc
gagatgctcgacaagatcgcgcagggtcacgccgtcgacggcatggaggccctgtcggca
gccctggtcgacggcctcgaactgctcatcgacgtggtgccggccaacaccctggtgctg
gtctccgaccccgaccgggtgcgcgctcgggcgcacgaactggtgcagacgagccaagag
tttctgcaggcgtcatgggtcgcggcggccgagggcggcaaggcgcccatcgacctggcc
gccggcgcctaccgagagttggccgacgtgcggcagcatgcgctcgggcggggccaggcc
tggtggtcgctgtcgccgtgggcggccgcgcccgaggccgtggcccccgtcgacgactgg
gacgaccccatcgatctcggcatcggcgagtccgacctggccggtgtcgagtcgcgcact
gtggcggcccgtgagggcgaggtgttccggggcgacgcccaagccggggtcgaggccgtc
cgagccagcgtcgcggccaactcacgggtggtcttggtagccgacagccccggcctggcc
acccgcatgggcgaggtgctcaccgaggcgggggtgccggcccgcggcgcactcgacctg
gcgcaaccgcccgagccgggcctcgccaccatcacggtcgccgaactgcgccacggcttc
accctgcccggggtcgagctgaccctctacacggcggccgatctggccggccagcgcgag
gtcgacaagtcggcgcgcaagatgcccgcccggcgcaagaacaccatcgacccgctcgaa
ctcgaggcgggcgacccggtggtgcacgaaacgcacggggttggccgctacgtcgaaatg
gtgcagcgcaccgttcaaggcgccacccgcgagtacctggtggtcgagtacgcgcccagc
aaacgcggtcaacccggcgaccggctgttcgtgccgatggaccagttgcacttgatcacc
cgctacgtcggcggcgagaacccgaccctcgacaagatgggcggcgccgactggaacaag
cgcaagtcgcgcgcccgcaaggccgtccgtgaaatcgcggccgaactgatcaagctgtac
gcggcgcggcaggcgtcccagggttacgcgttcggcgccgacaccccctggcagcgcgaa
ctcgaggacgccttcagctacgtcgaaacccccgaccagttggccgcgatcaccgaggtg
aaggccgacatgcagcaggtcattccgatggaccggctgatctgcggcgacgtcggctac
ggcaaaaccgagatcgccgtgcgggccgcgttcaaggctgtgatggacggcaagcaggtc
gccgtgctggtgcccaccaccctgctggtgcaacagcatcacgccacgttcgccgatcgc
tacgccggctttccggtcaccgtcgccccgctcagccgctttcagaccccggccgaggcg
aagaagaccgccgaaggcattgccgacggcagcgtcgacgtggtggtgggcacgcatcgc
ctgctcggcaacgaggtgcagttcaaagacctcggcctggtgatcgtcgacgaagagcag
cgattcggggtcgaacacaaagaggcgctgaagaagctgcggctcaacgtcgacgtgctg
tcgatgagcgccacccccattccgcgcaccctcgaaatggccatcaccggcattcgcgag
atgagcgtcatcgccacccctcccgaagagcggcacccggtgctcaccttcgccggcccg
tgggacgaagcccaggtgcgggctgcgatcaggcgcgaactggctcgtgagggccaggtc
ttctacattcacaaccgcgtcaactcgatcgagaagaccgccaaacggctggccgaactg
gtgccagaggctcgggtcgccgtggcccacgggcagatgaacgagcacgccctcgaacag
gtgatggtcgacttctgggagcgccgcgccgacgtgctggtctgcaccaccatcgtcgag
gccggtctcgacatctcgaccgccaacacgctgctgatcgagcgggccgacctgctgggc
ctgtcgcagttgcaccagcttcgtggacgggtcgggcgtggccgtgagcgcggctacgcc
tacttcttgtacccgcccgagaagccgctcaccgaaaccgcgcacgaccggctggccacc
atggcagcgcacaccgacctgggggccggcatggcgatcgcgatgaaagacctcgagatt
cgcggtgcgggcaacctgctgggcggggaacagtcggggcatatcgccgaggtgggcttc
gacctctacatcaggctggtgggcgaggcggtggccgacttccgcggcgaagacgtcgaa
cccgagcccgagatgaagatcgagttgccggtcgaagcgcacctaccggtcgactacgtc
gaatcggaacggctgcggttggagatgtacaagcggctggcgcaggtcagcgacgaagtg
ggcatcgaggccgtccgtgatgaactgcacgaccggtacggcccgctgcccgaaccggcc
gaggcgctgctcgcggtggcccggttccgcctgctggcgaggacgaagggcatcaccgag
atcatcatggccggcacgtccgtgcggttcagcccggccgacctgcccgattcgaagcag
ctgcggctcacccggctctaccccggttcgcaggtgcgcaagaccgccgggcacgtgctg
attccgcggccgatgacccgtccgatcgcggggcagcccatcgtcgatctgccattgctg
cagtgggcgaccacggtgctcgacgacatcttctga
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