Mycolicibacterium goodii: AFA91_26260
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Entry
AFA91_26260 CDS
T04008
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mgo
Mycolicibacterium goodii
Pathway
mgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFA91_26260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgo03019
]
AFA91_26260
03016 Transfer RNA biogenesis [BR:
mgo03016
]
AFA91_26260
Enzymes [BR:
mgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AFA91_26260
Messenger RNA biogenesis [BR:
mgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AFA91_26260
Transfer RNA biogenesis [BR:
mgo03016
]
Prokaryotic type
tRNA degradation factors
AFA91_26260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KH_5
KhpA-B_KH
DUF1490
DUF1773
Motif
Other DBs
NCBI-ProteinID:
AKS34816
UniProt:
A0A0K0XBQ9
LinkDB
All DBs
Position
complement(5632863..5635169)
Genome browser
AA seq
768 aa
AA seq
DB search
MSVVELEDGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGSAVAYLDDETMLLSATTASK
NPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQVVVTVLSLDPNDLYDVLAINAASASTQLAGLPFSGPVGGTRIALINDPSVGTADGG
QWVAFPTVEQLERAVFDMVVAGRVLEDGDVAIMMVEAEATENVVELIAGGAQAPTEAVVA
EGLEAAKPFIKVLCAAQQELADRAAKPAGEYPVFPDYEEDVYYAVASVATDALSEALTIA
GKTERNDRTDEIKVEVLERLAETYAGREKEIGAAFRSLTKKLVRQRILTDHFRIDGRGIT
DIRALSAEVAVIPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPENTKRYMHHYNF
PPYSTGETGRVGSPKRREIGHGALAERALVPVLPSIEEFPYAIRQVSEALGSNGSTSMGS
VCASTLALLNAGVPLKAPVAGIAMGLVSDDIEVEAGDGKKTERRYVALTDILGAEDAFGD
MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDRPDEMSPY
APRITTIKVPVDKIGEVIGPKGKMINSITEETGAQISIEDDGTVFVGAADGLSAQAAIDK
INAIANPQLPKVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKV
GDKLRVEIADIDNRGKISLVLVAEEAAESTEGAEKADKAAGDVAPAEA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagtcgaacttgaagacggtgtgttcgaatcgaccgctgtcatcgacaacggg
agcttcggcacccggaccatccgcttcgagaccgggcgcctcgcccagcaggccgccggc
tccgccgtcgcctatctcgacgacgagaccatgctgctgagcgcgacgaccgccagcaag
aaccccaaggaccacttcgacttcttcccgctgacggtggacgtcgaggagcggatgtac
gccgcgggccggatccctgggtcgttcttccgtcgtgagggccgtccctccaccgacgcg
atcctgacctgccgtctgatcgaccgtccgctgcgcccgtcgttcgtcgatggcctgcgc
aacgagatccaggtcgtggtgaccgtgctgagcctggatcccaatgatctgtacgacgtg
ctcgcgatcaacgccgcctcggcgtcgacgcagctcgcgggtctgccgttctcgggcccg
gtcggcggcacccgcatcgcgctgatcaatgatccgagtgtcggcaccgccgacggcggc
cagtgggtcgcgttcccgaccgtcgagcagcttgagcgcgccgtgttcgacatggtggtc
gccggccgcgtcctcgaagacggcgacgtggcgatcatgatggtcgaggccgaggcgacc
gagaacgtcgtcgagctgatcgccggcggcgcgcaggcccccaccgaggccgtcgtcgcc
gagggcctcgaggccgccaagccgttcatcaaggtgctgtgcgccgcgcagcaggagctc
gccgatcgcgcggccaagccggcaggcgagtacccggtgttccccgattacgaggaagac
gtgtactacgcggttgcctcggtggccaccgacgcgctgtcggaggccctgaccatcgcg
ggcaagaccgagcgcaacgaccgcaccgacgagatcaaggtcgaggtgctcgagcgtctc
gccgagacctacgccggacgtgagaaggaaatcggcgccgcgttccgctccctgaccaaa
aagcttgtgcgccagcgcatcctgaccgatcacttccgtatcgacgggcgtggcatcacc
gacatccgggccctctcggccgaggttgcggtgatcccgcgggcgcacggcagcgcgctg
ttcgagcgcggggagacccagatcctgggcgtcaccacgctggacatgatcaagatggct
cagcagatcgactcgctggggccggagaacaccaagcgctacatgcaccactacaacttc
ccgccgtactcgaccggtgagaccggtcgcgtcggctcgccgaagcgtcgcgagatcggc
cacggcgcgctggccgagcgggcactggtgccggtgctgccgagcatcgaggagttcccg
tacgccatccgccaggtgtccgaggcgctgggctccaacggctcgacgtcgatgggttcg
gtgtgcgcctcgacgctcgccctgctcaacgcgggtgtgccgctgaaggcgccggtcgcc
ggtatcgccatgggcctggtgtccgacgacattgaagttgaggcgggagacggcaagaag
accgagcgtcgctacgtcgccctcaccgacatcctcggcgccgaggacgccttcggtgac
atggacttcaaggttgcgggcaccaaggacttcgtgacggcgctgcagctcgacaccaag
ctcgacggcatcccgtcgcaggtgctggccggtgcgctcagccaggccaaggacgcgcgg
ctgacgatcctcgacgtgatggccgaggccatcgaccgccccgacgagatgagcccgtac
gcgcctcggatcaccaccatcaaggttccggtggacaagatcggcgaggtcatcggcccc
aagggcaagatgatcaactcgatcaccgaggagaccggcgcccagatctcgatcgaggac
gacggcacggtgttcgtcggcgccgccgacgggctgtccgcgcaggccgccatcgacaag
atcaacgcgatcgccaatccgcagctgcccaaggtcggcgagcggttcctcggcacggtc
gtcaagaccaccgacttcggtgccttcgtgtcgctgctcccgggccgcgacgggctggtg
cacataagcaagctcggcaagggcaagcgcatcgccaaggtcgaggacgtggtgaaggtc
ggcgacaagctccgggtggagatcgccgacatcgacaaccgcggcaagatctcgctggtg
ctcgtcgccgaggaagccgccgagtcgaccgagggcgccgagaaggccgataaggctgcc
ggtgatgttgcaccggccgaggcctga
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