Meleagris gallopavo (turkey): 100546474
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Entry
100546474 CDS
T01523
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03022
Basal transcription factors
mgp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100546474
09124 Replication and repair
03420 Nucleotide excision repair
100546474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100546474
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100546474
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100546474
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100546474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
100546474
NCBI-ProteinID:
XP_010724520
UniProt:
A0A803YPX2
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All DBs
Position
Z:65278161..65288479
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEVLKEDESGSLKATIEDILFKAKRKRIYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKNKRAEKMTEL
SGNPKKHIAALKKAVDMNCQGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFSSLTTCDPA
NIYELIKCLKAVKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPCLTLDGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQELPLEEYQGERCCQGCQAEIKDQNVYVC
KTCKNAFCVECDMFIHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcccgagaggactaagcgctgggaaggaggctacgagaggacgtgggaa
gtgctgaaggaagatgaatccgggtcgctgaaagcaaccatcgaggacatcctcttcaag
gcgaagaggaaaagaatctacgaacaccatggacaagtccggctgggaatgatgcgtcac
ctttatgtggttgttgatggatcaagaactatggaggaccaagatttaaaaccgaacaga
cttacttgcactttgaagctgctggaatattttgttgaagagtacttcgatcaaaatcct
attagtcagatgggcttaattgtaaccaagaataaaagagctgagaagatgacagagctt
tcaggtaacccaaaaaagcacatagctgctctgaagaaagcagtggatatgaactgccag
ggagagccatctctgtataattccctaaatttggccatgcagactttaaagcacatgcca
ggacacacaagcagagaggttttaatagtcttcagcagtcttacaacatgcgatccagcc
aacatctacgagctaatcaagtgtttgaaagcagttaagatcagagtgtctgtcattggt
ctaagtgctgaagttcgagtctgtacagtactgacccgagaaactggaggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagccctccacct
gccagttcaagttcggagtgctcccttattcgaatgggttttcctcagcacaccattgct
tccctttctgaccaagatgcaaagccatcctttagcatggcacaactggaaaacaacagt
gagccatgtcttacactggatgggtacttctgtcctcagtgcagagccaaatactgtgaa
cttcctgtggaatgcaagatctgtggtcttacactagtgtctgcacctcatctggctcgg
tcttaccaccacttgtttcctttggatgcctttcaggaacttccgctggaagaatatcag
ggagaacgatgttgtcaaggctgccaagcagaaatcaaagatcaaaatgtttatgtatgc
aaaacgtgcaagaatgcattttgtgtggaatgtgacatgtttattcatgattccctgcac
tgctgtcctggctgtattcacgagcaccctgctcccgtatcagtatga
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