Meleagris gallopavo (turkey): 100547310
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Entry
100547310 CDS
T01523
Symbol
UPF3A
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03013
Nucleocytoplasmic transport
mgp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100547310 (UPF3A)
03015 mRNA surveillance pathway
100547310 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100547310 (UPF3A)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100547310 (UPF3A)
mRNA cycle factors
P-body specific factors
100547310 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
100547310
NCBI-ProteinID:
XP_010726638
Ensembl:
ENSMGAG00000014837
LinkDB
All DBs
Position
1:complement(133154793..133179703)
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AA seq
432 aa
AA seq
DB search
MEDNSLLSAQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFR
NPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRK
FLESYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREER
RRRELEKKRLREEEKRKRREEERRKRKEAEKHKKISEKEIRIKLLKKPEKGDEPASEKHK
EKDEEADTEENKWDKSPGPGSIRSKSLEGSLKELKEKSQNDSDKEQRDLERRFRXKEPER
QRYRLDDGRKHRTHYEFDKFVRRNEEELKWGKGYNQDRGKKGNHNYSFTVEAVDKLGKED
KCDDMASKKERIRNKDRPAMQLYQPGARIRTHTGSTSKAYDCSGKSSEDALDKKYEVDNS
VGGGSEKSEEAE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaagataactctcttttatctgcgcaggtggttattcgacggctccctccttgtctc
accaaggagcagctggaggagcagctccaccctctccctgctcatgattattttgagttt
tgcactgctgatcccagcctttatcctcatctctactcaagagcatacattaactttaga
aatcctgaggacatccttctttttagagatcgctttgatggctatgtcttcattgataat
aaaggtttggagtaccctgcagtggttgaatttgctccatttcagaagatttcaaaaaag
aagttgaaaaagaaagatgccaaagctgggagcattgaagatgacccagaatataggaaa
tttttagaaagttactgtgctgatgaagagaaaatctgtgccaatcctgagactcttttg
ggagagattgaggccaaaacaagggaactcattgctagaagaacaacaccccttttggaa
tatattaaaaatagaaaattagaaaagcagagaattcgagaggagaaaagggaggaacga
agacggagggaattggagaagaaacgtctgagagaagaagagaaaaggaaacgcagagaa
gaggaaagacgtaaaaggaaagaagcagagaaacataagaaaatttctgaaaaagaaata
aggatcaagcttcttaagaagcctgaaaaaggagatgagccagccagtgagaaacacaaa
gaaaaagatgaagaagctgatactgaagaaaacaagtgggataagtctcctggacctggg
agtataagatccaaatcgttggaaggttcactaaaagagcttaaggagaagtcacaaaat
gatagtgacaaagagcaaagagatttggagagaagatttcgangaaaagaacctgaaagg
caaaggtatcgactggatgatggcagaaagcatagaactcactatgagtttgacaagttt
gtgagaaggaatgaagaagagctgaaatgggggaaaggatacaaccaagacagaggaaag
aaagggaaccacaactacagcttcactgtggaggcagtagacaaactgggtaaagaggac
aagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggatcgcccagccatg
cagctgtaccagccaggggctcgcatccgaacgcatacgggatccacgagtaaagcctat
gactgcagtgggaagtcttctgaagatgctcttgacaaaaagtatgaggtggataactca
gtgggaggtggctctgagaagagtgaggaagcagaataa
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