Pyricularia oryzae: MGG_00976 Help Entry MGG_00976         CDS       T01027                                  Name (RefSeq) regulator-nonsense transcripts 1   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism mgr  Pyricularia oryzae Pathway mgr03013   Nucleocytoplasmic transport mgr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:mgr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     MGG_00976    03015 mRNA surveillance pathway     MGG_00976  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mgr03019]     MGG_00976 Enzymes [BR:mgr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      MGG_00976     5.6.2.5  RNA 5'-3' helicase      MGG_00976 Messenger RNA biogenesis [BR:mgr03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      MGG_00976    mRNA cycle factors     Common to processing body (P body) and stress granule      MGG_00976 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD Helicase_RecD PIF1 UvrD-helicase SLFN-g3_helicase ATPase nSTAND3 SRP54 AAA_22 AAA_16 AAA_10 Motif Other DBs NCBI-GeneID:  2674784 NCBI-ProteinID:  XP_003717973 UniProt:  G4ND47 LinkDB All DBs Position 5:948805..953710 Genome browser AA seq 1105 aa AA seqDB search MEGAFTHLGNHLISDSAAAIKAGDTDDLSNIDADENLLYGKYGGRGGLGGARRRAADDDE TEALDDDDDESLASVPVDGMRGLSLKAAEEEKELPEHACAYCGIHSPACVVKCLGCKKWF CNSRGNTSSSHIINHLVRARHKEVQLHPESTLGDTILECYNCGVRNVFLLGFIPAKSDTV VVLLCRQPCAANPSSKDMSWDISRWSPLLDERNFLSWLVAVPTDAEQLRARHLTPPMIAK LEELWKEDANATVDDLEKNEQIDDEPHPVLLKYDDPYHYQNIFGPLVKMESDYDKKLKEA QSEDGLVVRWDYGLNNKHLASFILPKIESGDVKLAVGDEMRLKYKGELRPQWEGVGYVVK IPNNQSDEVTLELRKSGNDKSVPTECTHNFSADYVWKATSYDRMQLAMRNFAVDEMSVSG YIFHKLLGHEVAVAPMRTTMPKKFTAPGLPDLNGSQISAIKAVLSTPLSLIQGPPGTGKT VTSATIIYHLAKMNGSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFL ALHEQVRMNDTNPELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILSNADVVCCTCVG AGDPRLAKLKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAG LNQSLFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPW PVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGDIGVVTPYEGQ RSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRL NVALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRDRKCLVDGPLTNLQASLLQFSKPKTP FRPARFSQQHSQYAPSQAGYANGRFPGSNLNGGSGRDFDTGSMMSYIPDDVSSLHSSSLG GAGLASAYPAMFSNFNPEQWPGLPGVPGHGRSGNRNRGRGAESIAGESVANSEYTDASSS VIGGKGIGQGGVSLGAGIGAGIGAGLHDAVGAGRPTSYSHSDRLRQYVESGGRMTGPNNG YRRYDDDQQSISTAFASQAGGTGYD NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atggagggcgcgtttacgcacctcggcaaccacctgatttcggactctgcagccgcaatc aaggctggtgataccgacgacctttccaacatcgatgccgacgagaacctcctctatgga aaatatggcgggcgcggcggtctaggcggcgctcgccgtcgcgccgcggacgatgatgag accgaggccttggacgacgatgacgatgagagcctggccagcgttcccgtagacgggatg cgcggcctcagtctgaaagctgctgaagaggagaaagagttgccggagcatgcctgcgct tactgcggtatacattctccggcttgtgtagtcaagtgtcttggctgtaagaaatggttc tgcaactctcgtggcaacacgtcgtcctcccacataatcaaccatcttgttcgcgcgcgt cacaaggaggtccagctccatcccgaatccaccttgggcgatactatcttggagtgctac aactgcggagtccggaacgtctttcttctcggctttattcccgccaagtccgatactgtg gtggtccttctgtgtcgccagccatgcgccgctaacccgtcttccaaggacatgagctgg gatatttcgcgatggtcaccactgttagatgagcggaacttcctttcctggctcgttgct gttcctaccgatgccgagcagctccgcgcacggcacctgacaccgcccatgattgccaag cttgaggagctatggaaggaggatgcgaacgcaaccgtggacgatctagagaagaacgag caaattgacgacgagcctcacccagtgcttctcaaatacgacgacccataccactaccag aacatttttggtccgcttgtcaagatggagtcggactacgataagaagctgaaggaagcg cagtcagaggatggcctcgtcgttcggtgggactatggtctcaacaacaagcaccttgct agcttcatcttgcccaagatcgagtctggagacgttaagctagccgttggtgacgagatg cgactgaagtataagggagagctccgtccacagtgggaaggcgttggttatgtcgtgaag attcctaacaatcaatctgacgaggtgacgctggagctacggaagtcaggaaacgacaag tctgtgccaaccgagtgcacccacaacttttcggctgattatgtttggaaagcgacctca tacgatcgaatgcagctcgccatgcggaactttgcggtcgacgagatgagcgtcagtggc tacatcttccacaaactcctgggtcacgaggttgctgtggctccgatgcggactacgatg cccaaaaagttcaccgctcccggtcttcctgacctcaacggtagccagatcagtgcaatc aaggccgtcttgtccacgccgctgagtttgatccaggggccccccggaaccggaaagact gtgacctcggccaccatcatttaccaccttgccaagatgaatggcagccaagtcctggtc tgcgccccctccaacgttgccgttgaccagctgtgcgagcgagttcaccgcaccggcctc aaggttgtgcgcctgacggccaaatctcgtgaggacgtcgagtcttctgtcagcttcctt gctctgcacgagcaggttcgcatgaacgacaccaatccggaacttgccaagcttcagcag ctgaagagtgaactcggcgaactttcaagccaagatgagaagaagttcaagcagttaacc aaggccgccgagcgggagatcttgagcaacgcagacgttgtttgctgtacttgcgtcggc gctggtgaccctcgtcttgccaaactcaagttccgcaacgtactaattgacgagtcaaca cagtctgccgagccagagtgcatgattcctctggttctcggatgcaagcaagtcgtcctg gtgggtgaccacaagcagcttggcccggttattatgaacaagaaggccgcaaaagctggt ctgaaccagtctctgttcgagcgcctggtcaagcttgggttgacccccatcaggttgaac gttcagtaccgcatgcacccttgcctgtctgagttcccatccaacatgttttacgaggga tctttgcaaaacggtgttacgatccagcagcgccttcgccgtgacgtcgactttccctgg ccagttgcagacatgcccatgatgttctggtccaacttgggtaacgaggaaatttcagca tcaggcacatcctacctgaaccggaccgaggcttccaacgtcgagaagctcgtcacacgc ttcttcaaggctggagtcaagcccggtgacattggtgtcgtcacaccatacgagggccag aggagctatatcgtcagcacaatgcagaacacgggaactttcaagaaggagagctacaaa gaagttgaggttgcctcggtcgatgccttccagggccgtgaaaaggattttattgtcctt tcgtgtgtgcgctcgaacgagagccagggcattggtttcttgtctgacccgcgccgtctc aatgtggctctcactcgtgcaaagtatggcgtcgtcattatcggcaatcccaaggtcctt tcaaagcacgagctgtggcatcacttgctcattcatttccgtgatcgcaagtgcctggtc gatgggcctctcaccaacttgcaagcttcccttttgcaattcagcaagcccaagactccg ttccgacctgcacgcttctcccagcagcactcgcagtatgcgccaagtcaggcgggttat gccaacggccgcttccccggctcgaacctcaacggaggatctggcagggactttgataca ggctccatgatgtcttatattcccgacgatgtctcgtcccttcacagctcaagccttggc ggtgctggccttgcatctgcatatcctgccatgttctccaacttcaaccccgagcagtgg cctggtcttcccggcgtacctggacatggccgttctggcaacaggaatcgtggccggggt gcggagagcattgccggagagagtgtcgcaaactcggaatacacagacgcgagctctagc gtcattggtggcaagggcatcgggcagggtggtgtcagtctcggtgcaggaattggagct ggcatcggtgccggacttcatgatgccgttggcgcgggtcgtccgacctcttatagccac agcgatcgcctcaggcagtacgtcgagagcggcggccgcatgactggtccgaacaacggc taccgtcgctacgacgacgaccagcaaagcattagcacggcttttgccagtcaagcaggc ggcactggctatgactga

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