Pyricularia oryzae: MGG_03388
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Entry
MGG_03388 CDS
T01027
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mgr
Pyricularia oryzae
Pathway
mgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGG_03388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgr03019
]
MGG_03388
03036 Chromosome and associated proteins [BR:
mgr03036
]
MGG_03388
Enzymes [BR:
mgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MGG_03388
Messenger RNA biogenesis [BR:
mgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
MGG_03388
mRNA degradation factors
5'-3' decay
Decapping complex
MGG_03388
Chromosome and associated proteins [BR:
mgr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
MGG_03388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
2676879
NCBI-ProteinID:
XP_003716556
UniProt:
A4R715
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All DBs
Position
4:2056518..2058245
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AA seq
535 aa
AA seq
DB search
MADVLADQLRSATLSDATNNEDWRRNLNIPARDNRQQTEDVTNTKGLEFENFGLKRDLLM
GIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLI
LVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLA
GKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPISVKEFSDK
NMTNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELL
AKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLGTEIQPIPSTIDKSLYV
YDNPETIPRPINIPAQPSSAGNAQSAAPNQGPPPQQQRPHQGQENWQNQNGRHNGSSQQQ
QPRGPHQNRGRGGGRGRGGFQGQGQGQRNYNNNYRGGRGGHNQGQHQQQMPNQQS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgttagcagaccaactcaggtcagccacattgagtgacgccaccaacaat
gaagactggaggaggaatctgaacattcccgccagggacaacaggcaacaaactgaggat
gtgacaaacacgaaaggcctagaatttgagaactttggcctgaaacgagatctccttatg
ggcatatttgaggcaggattcgagaagccttcacccatccaggaggagagcatccccgtc
gccctcaccggacgcgacatcctcgcccgcgccaagaacggtaccggaaagacagcagcc
tttgtcgtaccagccctcgagacgatcaaccccaaggtatccaagatccaatgcctcatc
ctagtaccaacacgagagctggccatgcagacctcgcaagtctgcaagactctgggcaag
cacctaggcatcaacgttatggttacaactggtggtacgactttgagggacgacatcttg
cgtctgcaagaccctgtacacattgtagtcggtacgccgggtcgtatcctcgaccttgcg
ggtaaaaatgtcgccgacctcagcgaatgcccaatgttcatcatggacgaagccgacaag
cttctctccatcgaattcacccccgtcatcgagcagctcctgcagttccaccccaaggat
cgacaggtgatgctcttctccgctaccttccctatttctgttaaggaattttccgacaag
aacatgaccaacccctacgagatcaacctcatggacgagcttaccctcaggggtatcact
caatactatgcctttgtcgaggagaagcaaaaggtccactgcctgaacactctcttctcc
aaattgcagatcaaccaatccatcatcttctgcaattccacgaaccgagtcgaacttctt
gccaagaagatcaccgagctcggctactcgtgcttctacagtcatgccaagatgcagcag
caggcacgaaaccgtgtcttccacgacttcagaaacggagtctgcaggaacctggtgtgc
tctgatctgcttactcgaggtattgacattcaggctgtcaacgttgtcataaactttgac
ttccccaagaacgctgaaacttacttgcaccgtatcggacgatctggtcggtacggccac
ctcggtctggctatcaacctgatcagctgggaagaccggttcaacctttacaacatcgag
cgtgacttgggtaccgagatccagcccatcccttcgacgatcgacaagagcttgtacgtc
tacgacaacccggagaccattccccgtcccatcaacatccccgctcagccttcctcggcg
ggcaatgcgcaaagcgctgcacccaatcagggcccacctccccagcagcaaagaccgcat
caaggtcaagagaactggcaaaaccagaacggcaggcacaacggttccagccaacagcag
cagcctcgtggcccccaccaaaacaggggccgcggcggtgggcgcggacgtggaggcttc
caaggccagggtcagggacagcgcaactacaacaacaactacaggggtggccgtggtggc
cacaaccaagggcagcatcaacagcaaatgcccaaccagcagtcctaa
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