Mycoplasmoides gallisepticum VA94_7994-1-7P: HFMG94VAA_3629
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Entry
HFMG94VAA_3629 CDS
T02203
Symbol
cvfA
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mgv
Mycoplasmoides gallisepticum VA94_7994-1-7P
Pathway
mgv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFMG94VAA_3629 (cvfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgv03019
]
HFMG94VAA_3629 (cvfA)
Messenger RNA biogenesis [BR:
mgv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HFMG94VAA_3629 (cvfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
KH_1
Cas3_HD
PDDEXK_6
DUF4199
Motif
Other DBs
NCBI-ProteinID:
AFP76039
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All DBs
Position
complement(614023..615804)
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AA seq
593 aa
AA seq
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MTTISILLMYLIVGLLTALTVLIFVFILLKFYEFRFFKQTETYQRELEQEILKINKQEEL
EEKLKEHYLFQSNYKVFTKRDLREIRNFFIAVLSDKILLENKKKLLSNEIIEKKKENEEL
KTKLDAKKVQEKITLLKEMNLTHEEAKKRLLEEYRGYVRNDLDKMVKEEEKAANNKKNAI
TNELNKLLINAMGNVSLLTETVRMNTVKTIKYEYVDVDPIKVKKVTDDFFGKLIGKEGRN
KEYIERLFNVEIIIQPESSRISISSFDTIKLEVAYNALNKIIEAVNDQGTHVLDESLIRK
SWYGALNEFSAEAKRIGEETLKELGLYESAFIPTKEISEFIGRLKFRGSNTQNVLTHSIE
AAQIAESIADQLNLNKEKAKVCALLHDIGKAIDKESVSSEGKWKNLKYAANNHVSAGVAI
AQYYKFDIDIIDAINCHHGRKKIYEKSKNFYAKITKIADFLSAARPGVRFVKDNDIERRF
DTISNILTKYVDEKIISTYKILKNGYNINLMINPDITESEYSQLTLDLKKDIESDKELSK
YPITITYVQNITRSETTNAIAHAKKTVEIYSEDKAELVNDEELSTVEFLDEDI
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatctctatactattaatgtacctaatcgtgggcttattgaccgcgttaacc
gttttaatttttgtcttcattttacttaagttttacgaattcagattttttaaacaaact
gaaacatatcaacgtgaacttgaacaagaaattctaaagattaacaagcaagaagaactt
gaagaaaaactaaaagaacattatctgtttcaaagtaactacaaagtttttacaaaaaga
gatctaagagagattagaaatttctttatcgctgtattaagcgataagattttgttagaa
aacaaaaagaagttattgtctaatgaaatcatcgaaaagaaaaaagaaaacgaagaactg
aaaacaaaactagacgcaaaaaaagtccaagagaaaatcacattattaaaagagatgaac
ctaacccatgaagaagctaaaaaaagacttctagaagaatatcgaggttatgtaagaaat
gatcttgataagatggttaaagaagaagaaaaagccgcgaacaataagaaaaatgccatt
acaaatgagttaaataaacttcttattaatgcgatgggtaatgtgtctttgcttacagaa
actgtaagaatgaacacagtcaaaactattaagtacgaatacgtcgatgttgatccaatt
aaggtcaaaaaagttaccgacgatttttttggaaaactaattggtaaagaaggtagaaac
aaagaatacattgaaagattattcaatgtagaaattattattcaacccgaatcatcaaga
atctcaatttcttcgtttgatacgattaaattagaggttgcttataatgcattaaacaaa
attattgaagctgtcaacgatcaaggaactcatgttttagacgaaagtttaattagaaaa
agttgatatggagcactaaatgaattctcagcagaagctaagagaattggtgaagaaacg
cttaaagaattaggtttatatgaatctgcttttatcccaacaaaagaaatttctgaattc
attggtcgattaaaatttagaggttctaacacccaaaacgttttaactcattcaattgaa
gcagctcaaattgctgaaagtattgctgatcaacttaacctaaataaagaaaaagccaag
gtttgtgccttactgcatgatatcggtaaagcaatcgataaagaaagtgttagtagtgaa
ggtaaatgaaaaaaccttaaatatgcagctaacaaccacgttagtgctggtgtagcaatt
gctcagtactataagtttgatattgatattatcgatgcaattaactgccaccacggtaga
aaaaagatttatgaaaaatcaaaaaatttctatgcaaaaataacaaagatagccgatttc
ttatcagcagctagacccggtgtaagatttgttaaagataatgatattgaaagacgtttc
gacacaataagtaatatcttaaccaagtacgttgatgaaaagatcattagcacttacaag
attttaaaaaatggttacaacattaatctaatgatcaatccagatataactgaaagcgaa
tatagtcaattaacccttgatctaaaaaaagatattgaatctgataaagaactatctaaa
tatccgatcaccattacttacgttcaaaatatcactagaagcgaaacaacaaatgcgatc
gctcatgccaaaaaaactgttgaaatttattcagaagacaaggctgaattagttaacgat
gaagagctaagcacagttgaatttttagatgaagatatctaa
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