Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__4177
Help
Entry
MGMSRv2__4177 CDS
T02960
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00521
Streptomycin biosynthesis
mgy00523
Polyketide sugar unit biosynthesis
mgy00541
O-Antigen nucleotide sugar biosynthesis
mgy01100
Metabolic pathways
mgy01110
Biosynthesis of secondary metabolites
mgy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MGMSRv2__4177 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MGMSRv2__4177 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MGMSRv2__4177 (rfbC)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MGMSRv2__4177 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
CDL01392
UniProt:
V6F7Q9
LinkDB
All DBs
Position
complement(4272068..4272565)
Genome browser
AA seq
165 aa
AA seq
DB search
MIVDKSEIDGVLTVTPGIFEDYRGYYVETYNQHDYQAAGIAVPFVQDDISVSRRGVLRGL
HGDAKTWKLISCLSGEIYLAVLDCRDCSPTKGAWQGFTISDRNRMQVLVPPGVANGHAIL
SERAIFHYKQSEYYDPGSQFTVKWNDPAHGIWWPLSDPILSQRDR
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgacaaaagcgaaatcgacggtgtccttaccgtcacccccggcatcttcgag
gattaccgcggctattacgtcgaaacctataaccagcatgactaccaggccgccggcatc
gccgtccctttcgtccaggacgacatttcggtgtcgcgccggggcgtgctgcgcgggctg
catggcgatgccaagacctggaagctgatttcctgcctgtccggagaaatctatctggcc
gtcctcgattgccgggactgctcgcccaccaagggggcgtggcagggcttcaccatcagc
gaccgcaaccgaatgcaagtgctggtaccgccgggggtggccaacggtcacgccattctg
agcgagcgggcgatctttcactacaagcagtcggaatattatgaccccggcagccagttc
accgtcaaatggaacgatccggcgcacggcatctggtggccgctatccgatccgatcctg
tcgcagcgcgaccgttga
DBGET
integrated database retrieval system
