Marivirga harenae: Q3Y49_07255
Help
Entry
Q3Y49_07255 CDS
T09240
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhaa
Marivirga harenae
Pathway
mhaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q3Y49_07255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhaa03021
]
Q3Y49_07255 (rho)
03019 Messenger RNA biogenesis [BR:
mhaa03019
]
Q3Y49_07255 (rho)
Transcription machinery [BR:
mhaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Q3Y49_07255 (rho)
Messenger RNA biogenesis [BR:
mhaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q3Y49_07255 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
AAA_22
ATPase_2
AAA
Presenilin
Motif
Other DBs
NCBI-ProteinID:
WKV13623
LinkDB
All DBs
Position
1700646..1702283
Genome browser
AA seq
545 aa
AA seq
DB search
MYNIEELNLKLLSELKEIAEKLGVAQYKKLPKKELIYKILDQQALLPESDLPKKEEEKTT
PKSAPAPKKETAPKAKAPKREEKSENKAEKKSEDVPAKQEASADDKTDRKPRPAPKDKRP
RPERTERSNDKEDRANRPERAERSNDKEERANKPERGERKERTDNRSKKADIKDFDGIIE
NEGVLEMMQDGYGFLRSSDYNYLASPDDIYVSPSQIKLFGLKTGDTVKGQIRPPKEGEKY
FALLRVSSVNGKTTEEIRDRVPFEYLTPLFPEEKFNLSTKPNKYSTRILDLFAPIGKGQR
GMIVAQPKTGKTELLKEVANAMAENHPEAYLLILLIDERPEEVTDMARSVKAEVVSSTFD
EQADRHVKVASMVLEKAKRMVECGHDVVILLDSITRLARAYNTVIPSSGKILSGGVDANA
LHKPKRFFGAARNLENGGSLTILATALIETGSKMDEVIFEEFKGTGNMELVLDRKLANKR
IFPAIDVPASGTRREDLLMSKEELQRVWILRKFMADMNSGEAMELLLTKMKGTVDNNEFL
ISMNG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtataacattgaagaattaaacttaaagctactttctgaacttaaagagatagcagaa
aaactgggagtagcccagtacaagaaattgccgaagaaagaattgatttacaagattttg
gatcaacaagcacttttacctgaaagtgatttaccaaaaaaagaagaagagaaaactact
cctaaatcagctccggctccaaaaaaggaaacagctccaaaagctaaagcgccaaagcga
gaagaaaagtcagaaaataaggcagaaaaaaaatctgaggatgtacctgcaaaacaagaa
gcaagtgctgacgataaaacagatcgtaaaccgcgcccagccccgaaagataaacgacca
agacctgaaagaactgagcgttccaatgacaaagaggaccgagctaatagacccgaaaga
gctgagcgttccaatgataaagaggaacgagccaataaacctgagagaggtgagagaaaa
gaaagaactgataaccgatctaagaaagccgatattaaggattttgatggaatcatcgaa
aatgaaggtgttttggaaatgatgcaagatggatacggttttttacgttcctctgattat
aattatttagcaagtcctgatgatatttatgtttcgccatctcaaattaaattgtttggc
ttaaaaactggtgatacagtgaaaggtcaaatcagacccccaaaggaaggggaaaaatac
tttgcgcttctaagggtttcttctgttaatggaaaaacaactgaggaaataagagataga
gttccattcgaatacttaactccacttttccctgaagagaaattcaacttaagtacaaag
cctaacaaatattcaactcgtattttagatctatttgcaccaataggtaaaggccaacgg
gggatgatagtagctcaaccaaaaacaggtaaaactgagctattgaaggaagtagcaaat
gctatggctgaaaaccatccggaagcttatttattaattttgctaattgacgaacgtcct
gaagaggttacagatatggctcgttcagtaaaagcggaagtggtaagttctacttttgat
gagcaagcagatagacatgtgaaagtggctagtatggtgcttgaaaaagcaaaaaggatg
gtagaatgtgggcatgatgttgtaatccttttagattccatcactagactagcaagggca
tacaatactgtaatcccatcttctggtaagattttgtcaggtggtgtcgatgcaaatgct
ttacacaaaccgaagagattctttggagcagcacgtaacttagaaaatggaggttcatta
accattttagcaactgctttaattgaaaccggttcaaaaatggacgaggtgatctttgag
gagttcaaaggaacaggtaatatggaattggtgctagacagaaaattagcaaacaagcgt
attttccctgctattgatgttccagcatctggtaccagaagagaagacttattgatgagc
aaggaagaattgcaaagagtttggatattacgtaaattcatggcagatatgaactcggga
gaagcaatggaacttttattaactaaaatgaaaggaactgttgataacaatgagtttttg
atttccatgaatggatag
DBGET
integrated database retrieval system
