Miniphocaeibacter halophilus: JFY71_11940
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Entry
JFY71_11940 CDS
T08075
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mhap
Miniphocaeibacter halophilus
Pathway
mhap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JFY71_11940 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhap03400
]
JFY71_11940 (uvrB)
DNA repair and recombination proteins [BR:
mhap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JFY71_11940 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JFY71_11940 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
Myb_DNA-bind_7
Kinesin
AAA_22
AAA_7
UB2H
DPPIV_rep
DUF3071
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
QQK07957
UniProt:
A0A7T6VQ07
LinkDB
All DBs
Position
complement(2389666..2391633)
Genome browser
AA seq
655 aa
AA seq
DB search
MKFKLNSDFKPTGDQPEAIDKLVDGINKNMKAQTLKGVTGSGKTFTMANIIEKVQKPTLV
IAHNKTLAYQLASEFREFFPDNAVEFFVSYYDYYQPEAYVPQSDTYIEKDSSINDEIDKL
RHSATMALFERKDVIIVASVSCIYGLGDPIDYENLVVSLRPGMIKDRDEVMRKLVDIQYV
RNDINFTRGTFRVRGDSLDIFPASQDENSVRVEFFGDEIDRITEINSLTGEIIGTRNHIA
IYPASHFATSEEKVKKALVTIEEELEERIKYFKDNNQLLEAQRIEQRTNYDLEMLSEMGF
CTGIENYSRHLSGREAGSRPYTLIDYFPDDFLIIVDESHVTLPQIRGMYEGDKSRKTNLV
DYGFRLPSALDNRPLKFNEFESMINQILFVSATPGPYEKEHEEQVVEQIIRPTGLLDPKV
EVRPTKGQIDDLVTEIYKNIEKKERILITTLTKKMAEDLTKYLEELDIKVTYLHSDIDTL
ERMEIIRDLRLGKYDVLVGINLLREGLDLPEVSLIAILDADKEGFLRSETSLIQTIGRAA
RNVDGRVIMYGDNITRSMESAIFETNRRREIQDKYNKEHGITPKSINKEIRDTISVTQVA
EELSEYKFESDTITREDINNLIISMEEEMYKAAEALEFERAANLRDEIRKLKKDF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaattaaattcagattttaaacctactggtgatcaaccggaggctatagat
aaattagtagatggaattaataagaacatgaaggcccaaacactaaagggtgtaacaggt
tcaggtaagacttttacaatggctaatattattgaaaaagttcaaaaaccaaccttggta
attgcacataataaaacattagcatatcaattagctagtgaatttagggaattttttcca
gataatgccgttgaattttttgttagttattatgattactatcaaccggaagcctatgtt
cctcaaagtgacacctatatagagaaggatagttctataaatgatgaaatagataaatta
cgacattcagcaactatggctctttttgaaagaaaggatgttattatagttgcttcagtt
tcatgtatttatggtttaggggaccctattgattatgaaaatttagttgtttcattaagg
ccaggcatgattaaggatagagatgaagtaatgcgaaaattagttgatattcaatatgtt
agaaatgatattaactttactagaggtacttttagagttagaggggatagtctagatatt
tttccagcatcacaagatgaaaatagtgtaagagtagaattttttggagatgaaattgat
agaattacagaaattaattctttaacaggagaaataataggtactagaaatcatatagct
atttatcctgcttctcactttgctacatcggaagaaaaagtaaaaaaggcattggtaact
attgaggaagaattagaagaaagaattaaatattttaaagataataatcaattattggaa
gctcaaagaattgaacaaagaacaaattatgatttagaaatgctttcagaaatgggtttt
tgtactggtatagaaaattattcaagacatttaagtggaagagaagccggttcaagaccc
tatacgttaattgattattttccagatgattttttaattattgttgatgaatcccatgtt
acactaccacaaataagaggaatgtatgaaggggataagtcaagaaagacaaatctagtt
gactatggatttagattaccttctgcattggataatagacctttaaaatttaatgaattt
gaatctatgataaatcaaattctatttgtatctgccactcctggaccttacgaaaaagag
cacgaggaacaggttgtagagcaaattattagaccaacgggattattggatccgaaagtt
gaagttagaccgacaaaaggtcaaattgatgatttagttacagaaatatataagaatata
gaaaagaaggaaagaatcttaataactaccttaactaaaaaaatggcagaagatcttaca
aaatatttagaagaactggatattaaagtaacctatcttcattctgatattgatacttta
gagagaatggaaattattagggatttaagattgggtaaatatgatgttttagtaggtatt
aatctattaagagaagggttggacctgccggaagtgtctttaattgccatactcgatgca
gataaggaaggttttttaagatcggaaacttctttaatacaaacaataggaagagctgct
agaaatgtagatggaagggtaataatgtatggagataatattaccagatctatggagtcg
gcaatttttgaaacgaatagaagacgagaaatacaagataaatacaataaagaacatggt
ataacgccaaaatccattaataaggaaattagagatactatatctgttacacaagtagca
gaagaattatcagaatataaatttgaaagtgatactattacaagagaggatattaataat
ttaattattagtatggaagaggaaatgtataaggcagcagaagctttggaatttgaaaga
gctgctaatttaagagatgaaattagaaaattaaagaaggatttttag
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