Mycolicibacterium hassiacum: MHAS_03852
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Entry
MHAS_03852 CDS
T05715
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
mhas
Mycolicibacterium hassiacum
Brite
KEGG Orthology (KO) [BR:
mhas00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
MHAS_03852 (srmB)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
VCT92127
UniProt:
K5BIX1
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All DBs
Position
1:4112546..4114879
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AA seq
777 aa
AA seq
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MADFGRELLACAVDGAGAGRSTGAHDPLRHVADLPARPGRPASWPTWADPEVVQAFVDRG
VRTPWSHQLTAADLAHSGRHVVISTGTASGKSLAYQLPILTALKQDPRARALYLSPTKAL
GHDQLRAAIALTEAVPALRTVAPTAYDGDSPTEVRRFARERSRWIFSNPDMIHLSLLRNH
ARWAVFLRHLRYLVVDECHYYRGIFGSNVAMVLRRLLRLCARYSSGSGPTVILASATTAE
PGATASRLIGQTVAEVTEDGSPHGARTVALWEPALLDDLIGENGAPVRRSAGAEAARVMG
DLVAEGARTLTFVRSRRGAELTALGARARLEERAPQLVDTVASYRAGYLAEDRRALERAL
ADGRLRGLATTNALELGVDIAGLDAVVLAGFPGSVTSFWQQAGRAGRRGQSALIVLIARD
DPLDTYLVHHPSALLDRPIEQVVIDPTNPHVLGPQLLCAAVEMPLTEAEVRLWDAEAVVA
ALVDDGLLRRRPGGYFPAPGIDPHPAVDIRGGSGEQIAILEADTGRMLGSTSAGRAPASV
HPGAVYLHQGETYVVDSLDLEAGVAFVHAEDPGYATFARELTDIAVTGEGERKTVGAVTI
GLVPVSVTNTVIGYLRRRLSGEVLDFIELDMPSRTLDTMAVMCTVTPEALDDNGIDARRI
PGALHAAEHSAIGLLPLVASCDRGDIGGLSTAIGPVDGLPTIFVYDGYPGGAGFAERGFR
AMHTWWSATAAAIEACECRSGCPSCVQSPKCGNANDPLDKSGAVTVLRLVLRELAGR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcggccgcgagctgctggcctgcgcggtcgacggggccggcgccggccgg
tcgacgggcgcccatgatccgctacgccacgtcgcggatctgcccgcccggcccggccgt
cccgcgtcctggccgacctgggccgaccccgaagtggtgcaggcgttcgtcgaccgcggc
gtgcgcaccccctggtcgcaccagctgaccgccgccgacctggcccactccggccggcac
gtggtgatcagcaccggcaccgcgtcgggtaagtcgctggcctaccagctgccgatcctc
accgcgctcaaacaggacccgcgggcccgggcgctgtacctgtcgccgaccaaggcgctg
ggccacgatcagctgcgggcggcgatcgcgctcaccgaggcggtgccggccctgcgcacc
gtcgcaccgaccgcctacgacggcgacagccccaccgaggtgcgccgcttcgcccgggaa
cggtcccggtggatcttctccaaccccgacatgatccacctgtcgctgctgcgcaaccac
gcccgctgggcggtgttcttgcgccacctgcgctacctggtggtcgacgaatgtcactac
taccgcgggattttcggctccaatgtggcgatggtgctgcgccggctgctgcggctgtgc
gcgcgctactcgtccggttccgggccgacggtgatcctggccagcgccaccaccgccgaa
ccgggggcgaccgcctcccggctgatcgggcagaccgtcgcggaggtcaccgaggacggg
tcgccgcacggcgcgcgcacggtcgcactgtgggagcccgcgctgctcgacgacctgatc
ggcgagaacggggccccggtgcgccggtcggcgggggcggaggcggcccgggtgatgggg
gatctcgtcgccgagggggcgcgcacgctgacgttcgtgcggtcccggcgcggcgcggaa
ctgaccgcgctcggggcgcgggcccggctcgaggaacgggccccacagctggtcgacacg
gtcgcctcctaccgggccgggtatctggccgaggaccgccgggcgctggagcgggcgctg
gccgacgggcggctgcgcgggctggcgacgacgaacgcgctggagctgggggtcgacatc
gccgggctggacgcggtggtgctggccgggttcccgggcagcgtgacgtcgttctggcag
caggcgggccgggccggccgacgcgggcagagcgcactgatcgtgctgatcgcccgcgac
gacccgctggacacctacctggtacaccacccgtcggcgctgctggaccgcccgatcgag
caggtggtgatcgacccgaccaatccgcacgtgctggggccgcagctgctgtgcgccgcg
gtggagatgccgctgaccgaggcggaggtgcggctgtgggacgccgaggcggtggtggcc
gcgctggtcgacgacgggctgttgcgccgccgccccggcggctactttcccgcccccggc
atcgatccgcacccggcggtcgacatccgcggcggctcgggcgagcagatcgcgatcctg
gaggccgacaccggccggatgctgggcagcaccagcgcgggccgcgcgccggcgtcggtg
catccgggcgcggtgtatctgcaccagggcgagacctatgtggtggactcgctggatctc
gaggccggggtggcgttcgtgcacgccgaggaccccgggtacgccaccttcgcccgggaa
ctgaccgacatcgcggtcaccggcgagggggaacgaaagaccgtcggcgcggtcaccatc
gggctcgtcccggtgtcggtgaccaacaccgtgatcgggtatctgcggcgccggttgtcc
ggggaggtgctcgacttcatcgagctggacatgcccagccgcacgctggacaccatggcg
gtgatgtgcaccgtcaccccggaggcgttggacgacaacggaatcgacgcgcgccgcatc
cccggcgccctgcatgcggccgaacactccgcgatcgggctgctgccgctggtggccagc
tgtgaccgcggcgacatcggcgggttgtccacggcgatcggcccggtggacgggttgccg
acgatcttcgtctacgacggctatccgggcggtgccgggttcgccgaacgcggatttcgc
gcgatgcacacctggtggtcggccaccgccgcggccatcgaggcgtgcgaatgccgcagc
ggatgcccttcgtgtgtgcaatcgccgaagtgcggcaacgccaatgacccgctggacaag
tcgggagcggtcacggtgttgcggctggtgttgcgcgaactcgccggccggtaa
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