Mycolicibacterium helvum: MHEL_31420
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Entry
MHEL_31420 CDS
T07064
Symbol
ligD_2
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mhev
Mycolicibacterium helvum
Pathway
mhev03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mhev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MHEL_31420 (ligD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhev03400
]
MHEL_31420 (ligD_2)
Enzymes [BR:
mhev01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MHEL_31420 (ligD_2)
DNA repair and recombination proteins [BR:
mhev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MHEL_31420 (ligD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
RNA_ligase
DNA_primase_S
DNA_ligase_OB_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
BBY64899
UniProt:
A0A7I7T8V6
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All DBs
Position
3328390..3330702
Genome browser
AA seq
770 aa
AA seq
DB search
MVNYVWPPGATRGPRVVLTNADKVLYPATGTTKADVFEYYTSIAEVMLPHIAGRPVTRKR
WPNGVDESAFFEKQLASSAPDWLDRATVVHRSGSTTYPIVESSTGLAWIAQQAALEVHVP
QWRFTSAGKPGPATRLVFDLDPGEGVTMAQLGEVANAVRELMDDIGLTVHPLTSGSKGLH
LYAPLADPVSSSGAVTLARRVAQQLEQSMPTLVTATMTKSLRAGKVFLDWSQNSGSKTTI
APYSLRGRETPTVAAPRTWEEIGDPALRHLEYREVLARVAEEGDLLADMDADVPREDRLS
RYRGMRDSAKTPEPVPKASPAASDVAGQAAPAGNGNTFVIQEHHARRLHYDFRLERDGVL
VSWAVPKNLPDTPAVNHLAVHTEDHPLEYATFSGDIPKGEYGGGKVIIWDSGTYEAEKFR
DSGADKGGEVIVDLHGQRISGRYALIQTNGNQWLARRMKEQSTPHLADYSPMLATLGSVE
KLTGAQYGFEGKFDGYRLLVEISGGELRLQSRSGRDLTADYPQLQSLAADLADHDVILDG
EVVALDADGVPNFGEMQNRVRATRIEFWAFDILRLDGRSLLKAKYRDRRKVLETFAEGTD
LIVPPLIDGDGPDAIEFSRRKKWEGVVAKKWDSTYQPGRRSAAWIKDKNWMTQEAVIGGW
REGNGGRSSGIGALLLGIPDDGGLRFIGRVGTGFSDKELAKLREILAPLHTDESPFSTAL
PRLDAKGVTYVQPELVGEVRYGEWTSDGRLRHPSWRGLRPDKAPADVVRE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattacgtgtggccgccgggagcgacgaggggaccgcgcgtcgtgctgaccaac
gccgacaaggtgctttacccggctaccggcaccaccaaggccgacgtgttcgagtactac
acctcgatcgccgaggtgatgctgccgcatatcgccggccgacccgtcacccggaaacgc
tggcccaacggcgtcgatgagtcggcattcttcgaaaagcagcttgccagttcggcaccg
gattggctcgaccgcgcgacagtcgtacaccgctcgggcagcaccacgtatcccatcgtc
gagagttcgacgggcctggcgtggatcgctcagcaggccgcattggaagttcatgtgccg
caatggcgtttcacttcagccggaaagcccggtccggcaacacgtttggtcttcgatctc
gacccgggcgagggcgtgaccatggcgcagctgggcgaggtcgccaacgccgtgcgcgag
ttgatggacgacatcgggctgacggtgcacccgctcaccagtggcagcaaggggctgcat
ctgtacgccccgttggccgacccggtcagcagcagcggggcggtgacgctggcccgccgg
gtggcccagcagttggaacagagcatgcccacgttggtgaccgcgacgatgaccaagagc
ctgcgggccggcaaggtctttctggactggagccagaacagcgggtccaagaccacgatc
gcgccgtattcgctgcgcgggcgggagactccgacggtcgccgcgccgcgcacgtgggag
gagatcggcgatccggcgttgcggcacctggagtaccgcgaggtgctggcccgggtggcc
gaggagggggacctgctggccgacatggacgccgacgtgccacgtgaagatcgcctgagc
aggtatcgcggcatgcgggattcggccaagacgcccgagccggtccccaaggcgtcccct
gctgcgtccgatgttgccggccaggcggctccggccggcaacggcaacaccttcgtcatc
caggagcaccacgcccgccggctgcactacgactttcggctggagcgcgacggtgtgctg
gtgtcatgggcggtgccgaagaatctgccggacaccccggcggtcaaccacctcgctgtg
cacaccgaggatcacccgctggagtacgcgacgttctccggcgacatccccaagggcgaa
tatggcggcggcaaggtgatcatctgggactccggtacctatgaggcggagaagttccgg
gactccggggcagacaagggcggcgaggtgatcgtcgacctgcacgggcagcggatctcc
gggcgctatgcgctgattcagaccaacggcaaccagtggctggcgcgccggatgaaggag
cagtccacgccccacttggcggactactcgccgatgctggcgaccttgggttcggtcgag
aagctgaccggggcgcagtacgggttcgagggcaagttcgacggctatcgcttgctggtc
gagatttccggcggtgagttgcggctgcaatcccgcagcggccgggacctcaccgccgac
tatccccaactgcagtcgctggcagccgatctcgccgaccacgacgtgatcctcgacggc
gaggtggtggcgctggacgccgacggtgtgccgaacttcggcgagatgcagaatcgggtg
cgcgccaccaggatcgagttttgggcgttcgacatcctgcggctcgacgggcgctcgctg
ctaaaggcgaagtatcgcgaccggcgcaaggtgctggaaaccttcgccgagggaacggat
ttgatcgttccgccgctgatcgacggtgatgggccggacgcgatcgagttctcccgcagg
aagaagtgggaaggtgtcgtcgccaagaagtgggactcgacctatcagccgggccggcgg
tcggcagcgtggatcaaggacaagaactggatgacccaggaggcggtgatcggcggctgg
cgcgagggtaacggcggacgctcgagcgggatcggtgcgctactcctcgggatccccgac
gacggcggcttgcggttcatcggccgggtgggcacggggttctccgacaaggaactcgcg
aagctcagggagatcctcgcgccattgcacaccgacgaatcacccttcagcacagcgctt
cccaggctggacgccaagggcgtcacgtacgtgcagccagagttggtgggggaggtgcgt
tatggcgagtggacgtccgacggccggctgcgccatccgagctggcgcggcctgcggcct
gacaaggcgcccgccgacgtggtgcgagagtag
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