KEGG   Metallosphaera hakonensis JCM 8857 = DSM 7519: DFR87_06060
Entry
DFR87_06060       CDS       T05471                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mhk  Metallosphaera hakonensis JCM 8857 = DSM 7519
Pathway
mhk03030  DNA replication
mhk03410  Base excision repair
mhk03420  Nucleotide excision repair
mhk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFR87_06060
   03410 Base excision repair
    DFR87_06060
   03420 Nucleotide excision repair
    DFR87_06060
   03430 Mismatch repair
    DFR87_06060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhk03032]
    DFR87_06060
   03400 DNA repair and recombination proteins [BR:mhk03400]
    DFR87_06060
Enzymes [BR:mhk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DFR87_06060
    6.5.1.6  DNA ligase (ATP or NAD+)
     DFR87_06060
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DFR87_06060
DNA replication proteins [BR:mhk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DFR87_06060
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DFR87_06060
DNA repair and recombination proteins [BR:mhk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DFR87_06060
   NER (nucleotide excision repair)
    Other NER factors
     DFR87_06060
   MMR (mismatch excision repair)
    Other MMR factors
     DFR87_06060
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Spore_Cse60 mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: AWR99345
UniProt: A0A2U9ITP3
LinkDB
Position
1255642..1257438
AA seq 598 aa
MKFKLIAEYFDKLEKISSRIQLTSLLSELFKDTDKEVLDKVVYLIQGRLWPDFKGLPEIG
MGEKFLVKAIAMAFGQKEDEIDKLYKNIGDLGEVVFTIKNKSKAVNILSFIGNPNESGEL
EVNEVYNELVKIATSTGEGSRDVKIRTFTGLIKKATPLEAKYLVRFVEGRLRLGIGDATV
LDALAITFGGSTDYRPIIERAYNLRADLGDIAKIISTEGPEKLKNISPTPGIPIRPMLAE
RLSDPNEIMEKMKGKALVDYKYDGERAQIHRKGDQVYIFSRRMENITDQYIDIIDYVKQN
IVGDNFIIEGEIVPVDPQSSEMRPFQELMHRRRKNDINEAIKEYPVNLFLFDLMLFNDED
YTIRPLLERREILEKSLKENDKVHMASYIIADNVDKLREYFYQAISDGAEGVMVKSIGPD
SIYQAGSRGWLWIKLKKDYQSEMADTVDLVVVGAFYGKGKRGGKFSSLLMAAYNPERDIF
ETVCKVASGFSDQELDDLQKKIESIKREERHPRVSSEMVPDVWVTPSLVAEIIGAEITIS
PLHTCCKGDRGGLSIRFPRFIRWRDDKGPEDATTNQEIMEMYSKQLKRVEEKPVDENI
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgaagtttaagcttatcgcagagtactttgacaaacttgaaaaaatttcctctagaata
caattaacatcacttttgtctgaactcttcaaggatacagataaggaggtcctggataag
gtagtttatctgattcagggaaggctttggccggacttcaaaggtttaccggaaattgga
atgggagagaaatttctggtcaaggcaatcgctatggcctttggtcaaaaggaagacgag
atagataaattatataaaaatattggtgatctaggggaagttgtattcactatcaagaat
aaatctaaggctgtcaacatcttatcatttatagggaatcccaacgaaagtggagaacta
gaagtaaatgaagtttataacgaactggttaaaattgcaacaagtactggcgaaggaagc
agagacgtaaaaattcgtacctttactggcctcataaagaaagccactccactggaagct
aaataccttgtcaggtttgtggaaggtcgacttaggcttggaataggagatgcgactgtg
cttgatgctcttgcaattacctttggaggttcaactgattatagacctataattgaaaga
gcctataatctcagagctgacctgggagatatagcgaaaataatttccactgaagggcca
gagaaactgaagaatatctctcctactccaggcattcccataagaccaatgttagctgag
agactctctgatcccaatgagatcatggagaaaatgaaaggaaaagcactggttgattat
aaatacgatggagaaagggcccagattcacagaaaaggagaccaagtgtatatcttttcg
agaagaatggaaaatatcacagatcagtatatagatataatagattatgttaagcaaaat
attgtcggtgataactttattattgaaggtgaaattgttcctgtagatccacaaagcagc
gaaatgaggcctttccaggagcttatgcatagaaggcgtaaaaacgatataaatgaggca
ataaaggaatatccagttaacctattcctgtttgatttaatgctatttaatgacgaggac
tatacaattagacctcttctagaaaggagggaaatcctggagaaatctcttaaggaaaac
gacaaggtacatatggcgtcatatattatagccgacaatgttgataagttgagggagtat
ttttaccaagccatctctgacggtgcggagggcgttatggtaaaatccattggtcctgat
tctatttaccaggcaggatctagaggttggctttggatcaaattgaagaaggactaccag
agcgaaatggctgacactgttgatctggtcgtggttggggctttttacggtaaaggtaaa
agaggaggtaaatttagctcgttgctgatggctgcatataatccagagagagacatattc
gaaactgtttgcaaagtagcatcaggtttcagcgatcaggaacttgacgaccttcagaaa
aaaatagaaagtattaaaagagaagaaagacatcctagggtttcatcggagatggtacct
gatgtatgggtgacgccatctctagtggcagaaataataggtgcagaaattacaatatcc
cccttacacacctgttgcaaaggagatagaggaggtctatccataaggttccctaggttt
ataaggtggagagacgacaaaggtccagaggacgccacaactaaccaagaaataatggaa
atgtactctaagcaattaaagagagttgaggaaaaaccagtagatgaaaatatctaa

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