Methanosarcina horonobensis: MSHOH_3930
Help
Entry
MSHOH_3930 CDS
T03933
Name
(GenBank) Helicase, SNF2/RAD54 family
Organism
mhor
Methanosarcina horonobensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AKB80413
UniProt:
A0A0E3SJI2
LinkDB
All DBs
Position
complement(4819841..4823077)
Genome browser
AA seq
1078 aa
AA seq
DB search
MIILHAGRIGKQFFLWGESPAEIETPVVRRGRKPKNPISKPYPYDSGVENLSSALELLLG
SAGRKEAEKINVWIPTTGGNPVPSSPLVAEIPYSKAEPALAPWTIHAYPLEAEEAIVLLC
ACMGKRVLAPGIISGNDLLWWADALKFAGSLVAGQKYLPGVRVEEGEYRAFWEPVFSGED
AGELAKLAKQMPPAARALAPETYSMPPEMPAALAARQFVEDSLDWIVRSEIGEKELAKET
RKRKSFDSVHDAWISALKSPDGLIYGDEKELLQLAARTREWQRPLTILTTSPFRFCFRLE
EPAEEEETEETEENESGIGDTKKGREGIADIEVPEGLWYVRYLLQSYEDPSLLIPVKEAW
KPKKGSPLKKYDVKNIRQFMLSSLGQAAGISAGIASSLEAPNPSGYSLDAKEAYRFLTES
AVNLSQVGFGILLPGWWTRKGTKTHLKAQAKVKGKKLQAGSGLTLDEIVGFDWQIALGDR
ALTVRELQALAKLKAPLVKFRGQWVEVNDAEIRAALEFWKKNPNGEASLREVLKMAVGTS
EKADGVDVEGLNATGWIGALISRLKDKTGFEELPAPNGFSGTLRPYQFRGYSWLAFLRQW
GIGACLADDMGLGKTVQTLALIQHDLEQAKEQVEKPAKEQVEEKVDERKAPKPVLLVCPT
SVINNWKKEASRFTPELSVMVHHGTSRKKEEEFKKEAMNHAIVISSYGLLQRDVKFLKGV
PWTGVVLDEAQNIKNPETKQAKAARALEADYRIALTGTPVENNVGDLWSIMEFLNPGFLG
SQAGFKQNFFIPIQAERDQEAARRLKEITGPFILRRLKTDTSIISDLPEKMEMKTYCTLT
KEQASLYAAVLEDIEEAMEGAEEGIQRKGIILSALSRLKQVCNHPAQFLKDNSAIPGRSG
KLARLTEMLDVVLANGEKALVFTQFAEMGKMLKEHLQASFGCEVLFLHGGVPKKQRDRML
ERFQEGKEYLPIFVLSLKAGGTGLNLTEANHVFHFDRWWNPAVENQATDRAFRIGQTKNV
EVHKFICAGTLEEKIDEIIERKVQVAENVVGTGEDWLTELSNDELKDILALREEAVGE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgataattcttcatgcaggaagaatcggaaaacagttcttcttatggggtgaaagcccg
gctgaaattgaaactccggttgttcggcgcgggagaaaacctaaaaacccgatttcaaaa
ccttacccttatgattccggcgttgaaaacctgtcttctgctcttgagctgctgctgggc
agtgctggccggaaagaggcggagaaaattaacgtctggatcccgacaacaggcgggaat
ccggtcccttccagccctctcgttgctgaaattccatattcgaaagcagaaccggcactt
gctccctggactatccatgcatatcctctggaagctgaagaagctattgttctcctgtgc
gcctgtatgggtaaacgagttcttgctcccggcataatctcgggaaatgaccttctctgg
tgggcagatgccctgaaatttgcaggttcgctggtagcaggacagaaatatcttcctggc
gtcagggtcgaggaaggggaatacagggctttctgggagccagtattttccggagaagat
gcaggagagctggcaaaacttgcaaagcaaatgcctcctgctgcaagggctcttgctcct
gaaacttattccatgccgccggaaatgcctgcggctttagcggcaaggcagtttgttgaa
gattctcttgactggatagtccggtccgagataggggaaaaagagcttgcaaaagaaacg
cgcaaaaggaaatcctttgatagcgtccatgatgcctggatttctgctcttaaaagccct
gacgggctgatctatggggatgaaaaagaactcctgcagcttgcggcccggacccgtgaa
tggcagcgtccccttactatccttactacttcacctttcaggttctgtttccggctggaa
gaaccggctgaggaagaagaaacagaagaaacagaagaaaatgaaagtgggataggagat
actaaaaaaggcagggaagggatagctgatatagaagttcccgaaggactctggtacgtc
cgctacctgcttcagtcctacgaagacccgagccttctgatccctgtaaaagaggcctgg
aagcccaaaaagggcagccctttgaaaaaatacgatgtaaaaaacattcgccaatttatg
ttatcttccctcggacaggctgccggcataagtgcaggaattgcttccagccttgaagct
cccaatccgtccggatattcccttgatgcgaaagaggcttaccgcttcctgaccgaaagt
gcagtgaacttaagccaggtgggtttcggaatacttctcccgggctggtggacccgtaaa
ggtacaaaaacacacttaaaagcccaggctaaggttaagggcaaaaagttacaggccgga
agcgggcttacactcgatgaaatcgtcggctttgactggcaaattgcccttggagatagg
gcacttacagtcagagaactgcaggctcttgcaaagctcaaagctccgcttgtgaaattc
cgcgggcagtgggtcgaggtaaacgatgcggaaatcagggctgcccttgagttctggaag
aaaaatcccaacggggaagcaagcctgcgcgaagttctaaaaatggcggtgggaacttcc
gaaaaagccgatggtgtggacgttgaagggctcaatgcaaccggctggattggagcatta
atcagccgtttgaaggacaaaaccggatttgaagaacttccggcccccaacggattttcc
ggaacacttcggccctaccagttcagaggttattcctggctggctttcctgagacagtgg
ggcataggagcctgccttgcagatgacatggggcttggtaaaactgtccagacgcttgct
cttatccagcatgatctggaacaggctaaagagcaggttgaaaaaccggctaaagaacag
gttgaagaaaaggttgatgaacgtaaagccccaaaaccggtccttctggtctgtccgacc
tctgtcatcaacaactggaaaaaagaggcttcccgcttcacgcctgaactttcggtaatg
gtccaccacggaaccagccggaaaaaagaagaagaattcaaaaaagaagccatgaatcat
gctattgttatctcaagctatggacttttacagcgcgatgttaagtttttaaagggggtt
ccctggaccggcgttgtactcgacgaagcccagaatataaaaaacccggaaactaaacag
gcaaaggcagcaagggctctggaagccgattatcgcatagcccttacagggactccggtt
gaaaataacgtgggagacctctggtccatcatggagtttttaaacccgggcttcctcggc
agccaggcaggtttcaagcagaatttcttcattcccattcaggctgaaagagatcaggaa
gctgcaaggaggctaaaagaaattacaggtcccttcatcctgcgccgtttgaagaccgat
acttcgattatctccgacctgccggaaaaaatggagatgaagacctattgcacgctgaca
aaagaacaggcctccctctatgctgcggtcctcgaagatatcgaagaggcaatggaagga
gctgaagaaggcatccagagaaaaggtataatcctatctgctctttccaggctcaagcag
gtctgcaaccacccggcacagtttttgaaggataactccgctatcccgggcaggtcagga
aaactcgcaaggcttacggaaatgctggacgtagtcctagcaaacggggaaaaagccctt
gttttcacccagtttgcggagatgggaaaaatgctaaaagaacacctgcaggcaagcttt
ggctgtgaagtccttttcctgcacggcggggtccccaaaaagcagagggacaggatgctt
gagcgtttccaggagggaaaagaatacctccctatctttgtcctctccctcaaagcagga
ggcacggggcttaaccttacagaggccaaccacgtttttcactttgaccgttggtggaac
ccggctgttgaaaatcaggccacggacagggcattccgtataggccagacaaagaacgtt
gaggtgcataagttcatctgtgccggcacactggaagaaaaaatcgatgagattatcgag
cgcaaagttcaggtcgcagagaacgtcgtcggaacaggcgaagattggctgacagaactt
tccaatgatgaattgaaggatattctagctcttcgagaagaagcggtaggtgaataa
DBGET
integrated database retrieval system
