Mycobacterium intracellulare ATCC 13950: OCU_45510
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Entry
OCU_45510 CDS
T02158
Name
(GenBank) DNA-binding protein
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mia03000
]
OCU_45510
Transcription factors [BR:
mia03000
]
Prokaryotic type
Helix-turn-helix
XRE family
OCU_45510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_25
HTH_26
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AFC45770
UniProt:
H8IUA7
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All DBs
Position
4781489..4782904
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AA seq
471 aa
AA seq
DB search
MSKTFVGSRVRQLRNERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVD
ATFFSSQDDTRLVAELREVTLDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTA
QLAAATEERFSDGSGSGSITMPHEEVRDYFYRRQNYLHELDTAAEELTIKMRLHHGDLAR
ELTRRLTEVHGVHINRRIDLGDTVLHRYDPATKTLEISNHLSLGQQVFKMAAELAYLEFG
DLIDDLVAQGKFTSDESHTLARLGLANYFAAAAVLPYRQFHDVAENFRYDVERLSSFYSI
SYETIAHRLSTMQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETF
ANPGKILVQIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSEGL
DLSGEISTPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVTQP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaagacgttcgtcggctcgcgggtccgccagctgcgcaacgagcgcgggttttcc
caggccgcgctggctcagatgctggaaatctccccgagctacctcaaccagatcgagcac
gacgttcgccccctgacggtggccgtgctgctgcgcatcaccgaggtgttcggggtggac
gccacgttcttctcctcacaggacgacacccggctggtcgccgagctgcgcgaggtcacc
ctggaccgcgacctcgacatcgacgtcgacccgaccgaggtcgccgaaatggtcagcgct
catcccgggttggcgcgggcggtggtcaacctgcaccgccgttaccggatcaccaccgcg
cagctggcggccgccaccgaggagcggttctccgacggcagcggcagcggatcgatcacc
atgccgcacgaggaggtgcgcgactacttctaccgacggcagaactacctgcacgagctg
gacaccgccgccgaggagctcaccatcaagatgcggttgcaccacggcgatctggcccgg
gagttgacgcgccggctcaccgaggtgcacggggtgcacatcaaccgccgcatcgatctc
ggcgacaccgtgctgcaccgctacgaccccgccaccaagacactggagatcagcaatcac
ctctcgctggggcagcaggtgttcaagatggccgccgaactggcctacctcgagttcggg
gatctgatcgatgacctggtcgcgcagggcaagttcaccagcgacgagtcgcatacgctg
gcccggctcggtctggccaactacttcgccgcggccgccgtgctcccctaccgccaattc
cacgacgtcgcagagaatttccgctacgacgtcgaacggttgtcttccttctactcgatc
agctacgagaccatcgcgcaccggctctcgacgatgcagcgcccgtcgatgcgcggggtg
ccgttctccttcgtccgggtcgaccgcgccggcaacatgtcaaaacgccagtccgccacc
ggttttcatttctcctccagcggcggcacctgcccgctgtggaacgtctacgaaaccttc
gccaacccgggcaagatcctggtccagatcgcgcagatgcccgacggccgcaactacatg
tgggtggcccgcaccgtggaacgacgcgcggcccggtatggtcagcccggtaagaccttc
gcgatcggcctggggtgcgagcttcgccacgcgcaccggctcgtctactcggaaggactc
gacttgtcgggggaaatctccacaccgatcggcgcgggatgccgggtctgtgagcgcgac
aactgtccgcagcgcgccttcccggcgctcgggcgcgcgctcgatctcgacgagcatcgc
agcacggtgtccccgtacctggtgacgcaaccgtga
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