Microbulbifer aggregans: AUP74_01884
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Entry
AUP74_01884 CDS
T04560
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03030
DNA replication
micc03430
Mismatch repair
micc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AUP74_01884 (holC)
03430 Mismatch repair
AUP74_01884 (holC)
03440 Homologous recombination
AUP74_01884 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micc03032
]
AUP74_01884 (holC)
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_01884 (holC)
Enzymes [BR:
micc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AUP74_01884 (holC)
DNA replication proteins [BR:
micc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AUP74_01884 (holC)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AUP74_01884 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF460
Motif
Other DBs
NCBI-ProteinID:
AOS97315
UniProt:
A0A1C9W867
LinkDB
All DBs
Position
complement(2165273..2165701)
Genome browser
AA seq
142 aa
AA seq
DB search
MTRIDFYILSSDTPESGDHFACRLAEKAYRAGLRVLVAVDNAERAEALDRLLWTFREDTF
LPHDRQQADKQAAVEINCGEDPGPHHGLLINLCSEVPGWFSRFERLAEIVIQQPDALARS
RQRYGYFRDRGYPLQSHRISNH
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgatttctacatcctctcctccgacaccccggaatccggcgaccacttt
gcctgccggctggcagagaaggcctaccgggccggactgcgggttctcgtcgccgtggat
aacgcggagcgggccgaggctctggacaggctcctgtggacctttcgcgaggacactttt
ctcccccacgaccgacaacaggcggacaagcaggccgcagtggaaatcaactgcggcgag
gatccaggaccccatcatggcctcctgatcaacctctgcagcgaagtacccggttggttc
agccgctttgaacggctcgccgagatcgtcatccagcagcccgacgcccttgcccgttca
cgacagcgttacggctactttcgcgaccgcggatatccgttacaatcccatcgcatcagt
aatcactaa
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