Microbulbifer aggregans: AUP74_02279
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Entry
AUP74_02279 CDS
T04560
Symbol
uvrD_2
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03420
Nucleotide excision repair
micc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUP74_02279 (uvrD_2)
03430 Mismatch repair
AUP74_02279 (uvrD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02279 (uvrD_2)
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUP74_02279 (uvrD_2)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUP74_02279 (uvrD_2)
MMR (mismatch excision repair)
Other MMR factors
AUP74_02279 (uvrD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
Herpes_ori_bp
AAA_22
DUF6675
DTX3L_a-b
Motif
Other DBs
NCBI-ProteinID:
AOS97687
UniProt:
A0A1C9W948
LinkDB
All DBs
Position
complement(2601270..2603492)
Genome browser
AA seq
740 aa
AA seq
DB search
MGEPELTEEQQAIAAHPGGHAKIIAVAGSGKTTALLHYVKNRLASGVAPQRMLVLMYNRS
AREDFARRLVTLVPGPVPTVQTFHSLGYRLYQRMITNGHIAPAKLSPLPQSVIQLQIWRA
IEECAPPEELEDIRARKQSEVEAAEFFIDYTKTILSGDLSAFQELKLGDEYLYFLKVFRA
FEDWRRSQQAVTYADLIYDPAILLSLCPDIAEQYGSHFEDILVDEYQDINAVQHFLLQVL
YGKSGNVIAIGDPDQTIYEWRGSKPGYLLRYFDGDFPPSNVYQLSRTFRYGHELSLAANH
FIQNNRERADILCLSPESGPATGVNLTATDNEPRWLVEHLRRRQKQGKKLADVAILVRLW
SVAAPIELALLAANIPYHSANRNTVLSRRELRPLFWSLNIASGRFAELPAERRRRGLYEW
LTAPHIRIPRRVLEPICETLAHREGDWGQGLYELTPAELSPAQAKRLKQRAALLKECESW
RGTAGELLRRQLGELDYLSGIADDSFTRQQGEERQQTVLAFCQFLDSLRQPAAEALAHLQ
ELQRQHREGERGHADAILITTMHQSKGLEWQQVIIPSLSQNNMPYQPQRDFSAPASLESE
RRLLYVAMTRARRELVLLTPSPPQKSGGDDDAQRPSLFIEEMQLPLCRSLAAALEEQPET
LHSDAPMSRLGLRYLEKLGYSPEIDAPAAPLRRPDCGEGIRHRKLGYGRVVKWEGERLVV
LFSDRVTRRFDWERLQPFLL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacccgagttaaccgaagaacaacaggcaatcgctgcacaccccggcgggcat
gccaagatcatcgccgtggccggctctggcaagaccaccgccctgctgcactacgtgaag
aaccgcctcgcaagcggcgtagcgccacagcgaatgctggtgctgatgtataaccgcagt
gcccgggaagattttgcgcggcgcctggtaacactggtgccgggcccggtgccgacagtg
cagacctttcacagccttggttaccggctgtaccagcgcatgatcaccaatggccatatt
gctccggccaagctctctcctcttccccagtccgttattcagctgcagatctggcgcgcg
attgaggagtgcgccccaccggaagagctggaggatatccgcgcgcgcaagcagtccgag
gtggaagccgcggaatttttcatcgactacaccaagacgattctgagtggtgacctgagc
gcatttcaggagctcaaactcggggatgaatacctgtactttctaaaggtattccgcgca
ttcgaagactggcgacgaagccagcaggcggtgacctatgccgacctgatttatgatccg
gccatcctgttgagcctgtgcccggatattgccgagcagtacggcagtcatttcgaggac
atcctggtggacgagtaccaggatatcaatgcggtgcagcacttcctgctgcaagtcctc
tatggcaagtccggaaacgtcattgccatcggcgacccggatcagaccatctatgaatgg
cggggctccaagccgggttacctgctgcgttatttcgacggggatttcccaccgtcgaat
gtgtatcagctgagccgcaccttccgctacggccacgaactctcgctggcggcgaaccac
ttcattcagaataaccgcgagcgcgccgacatcctctgcctgtctcctgaaagcggaccg
gcaacaggcgtgaacctcacggctaccgacaatgagccccgctggctggtcgagcacctg
cgccgacgccagaaacagggaaagaagctggcggatgtcgccattctggtacggctgtgg
tcggtggcagctcctatcgagctggcgttgctggctgcgaatatcccgtaccattcagcc
aaccgaaatacggtgctgtcacgccgggaactgcgcccgctgttctggagcctgaatatc
gcctccggccgatttgccgagttgccggctgaacgccgccgccgcggactctacgagtgg
ctcacggctccccatattcgcattccccgccgggtactcgagcccatttgcgagacgctg
gcccaccgagaaggcgactggggccaggggctctatgagctgacgccagcagaactcagc
ccggcccaggcaaaacgcctcaagcagcgggcagctctgctcaaggagtgcgaaagctgg
cgcggcaccgccggagagctgctccggcgccagctgggggagctggactatctcagcggc
attgcggatgacagcttcacccggcaacagggcgaggagcgccagcagacggtgctcgct
ttctgccagtttctggacagcctgcgacagccagcagcggaagcgctggcccacctgcag
gaattgcagcgccagcatcgggagggggaacgggggcatgcggatgcaatcctgatcacc
accatgcaccagtccaaggggctggagtggcagcaggtgatcatcccctccctcagccag
aacaatatgccctatcagccacagcgggatttctccgctcccgcctcactggagagtgag
cgccgccttctttacgtcgccatgaccagggcccggcgggaactggtgctactgaccccc
tccccaccccagaagtcgggtggtgacgacgatgcacagcggccatcgctgtttatcgaa
gagatgcagttgccgctgtgccggagcctggccgcggcactggaggagcagccggaaaca
ctacacagcgatgccccgatgagccggttggggcttcgctatctggagaaactgggttac
tcgccggaaatcgatgcgcccgctgcaccgctgcgccggccggattgtggcgagggcatc
cgccaccgcaaattgggttacgggcgggtagttaaatgggagggagaacggctggtggtg
ctgttcagtgacagggtaacccggcgcttcgactgggagcgcctgcagccgtttcttctt
tag
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