KEGG   Microlunatus sp. Gsoil 973: GJV80_05825
Entry
GJV80_05825       CDS       T06297                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
micg  Microlunatus sp. Gsoil 973
Pathway
micg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:micg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    GJV80_05825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:micg03400]
    GJV80_05825
Enzymes [BR:micg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GJV80_05825
DNA repair and recombination proteins [BR:micg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GJV80_05825
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_primase_S RNA_ligase
Other DBs
NCBI-ProteinID: QGN32394
UniProt: A0A6I5VIV5
LinkDB
Position
complement(1240563..1243091)
AA seq 842 aa
MAQAEQTQTVTVDGRLLKISNLDKILYPQTGTTKGEVIAYYTAIARYMVPHLSGRPVTRK
RWVHGVGTDAEPGPVFFQKNLPPSGVPDWVLRRRIEHRGGTNSYPVVEDTATLVWLAQLA
SLEIHVPQWRFDDDGNPLNPDRLVLDLDPGPGVGLPECSEVAHWARDLLDAIGLELFPVT
SGSKGLHLYAHLDGNYSSADASKIAKEVAETLQKQHPDLVVAEMAKAQRTGKVFIDWSQN
NGNKTTISPYSLRGRTRPMVAVPRSWDELDEDLEHLDFHEALRRVEEFGDLLQPLAPGGP
AQPSAPDRLTKYRSMRDPDRTPEPVPATPPVPRTDGEPTFVIQEHHARRLHYDFRLEHDG
VLVSWAVPKGVPIDTRTNHLAVQTEDHPIEYGSFQGIIPHAEYGGGEVIIFDTGTYTVEK
WRDGREVIAILKGTKPGGVGTDCKVALIHTGGRGGQPENHWLMHLMSGNPSEPRPATDEQ
LKALHEQAEHSESMVWHSNRGDGNEEDGDETGTERTEPEFPPEIKPMLASSSDNPTFSRP
DEWAFEMKWDGVRAICYLAGGRARILSRRGLDVTGTYPEIADALARLDVGNAVLDGEIVA
LDEQGRPSFSRLQNRINLSGPADVSRARRETPVQLVIFDIMYLNGRSLVKQTYDDRRAEL
EKLITGGRIQLPPSFDGDQEAAQIASTSLGMEGMVAKRRSSTYQPGGRGQTWVKIKNFHT
QEVVVGGWRPGNGRRSGTVGSLLIGVPIAGDHKGRLRYIGRVGSGFSDAELGRITKLIAG
MGRDDSPLEDVPRLDARDAHWIDPDLVGEVSYAEWTGDGRLRFPVWRGWRPDKSPEEVVV
EE
NT seq 2529 nt   +upstreamnt  +downstreamnt
atggcccaggcagagcagacccagacggtcaccgtcgacggtcggctgctcaagatcagc
aatctggacaagatcctctatccgcagaccgggaccaccaagggcgaggtgatcgcgtac
tacaccgcgatcgcgcgctacatggtcccgcacttgtccgggcgtccggtgacccgcaaa
cggtgggtgcacggggtcggcaccgacgccgagccgggaccggtgttcttccagaagaac
ctgccgcccagcggggtcccggactgggtactgcggcggcggatcgaacatcgcggcggc
accaacagctacccggtcgtcgaggacaccgcgacgctggtctggctggcgcaactggca
tcgttggagatccacgtcccgcagtggcgattcgacgacgacggcaatccgctcaatccc
gaccggctggtcctcgatcttgatccgggacccggggtcggcctgccggagtgctcggag
gtggcccactgggcacgagacctgctggacgcgatcggcctggagctctttccggtgacc
agtggcagcaagggcctgcacctgtacgcccatctggacggcaactacagctcggccgac
gcctccaagatcgccaaggaggtcgccgagacgctgcagaagcagcatcccgatcttgtc
gtcgctgagatggccaaggcccagcgcaccggcaaggtgttcatcgactggagtcagaac
aacggcaacaagacgaccatctcgccgtactcgctgcgcggacgcacccggccgatggtg
gccgtaccacgcagctgggacgaactcgatgaggatctggagcacctcgacttccacgag
gcattacgcagggtcgaggagttcggcgaccttctccagccccttgcaccgggcggtcct
gcccaaccgtccgcgccggaccggttgaccaagtaccggagcatgcgcgacccggacagg
acgcccgagccggtgcccgccaccccaccggttccccggaccgacggtgaaccgaccttc
gtgatccaggaacaccacgcccggcgattgcactatgacttccgtctggaacacgacggt
gtgctggtcagctgggccgtgcccaagggtgtgccgatcgacacccgcaccaatcacctg
gcggtccagaccgaagatcatccgatcgagtacggctccttccaggggatcatcccgcac
gccgagtacggcggtggtgaggtgatcatcttcgacaccgggacgtacacggtcgagaag
tggcgggacggtcgggaggtgatcgcgatcttgaagggcaccaagcccggcggcgtcggc
accgactgcaaggtcgcgctgatccacaccggcggacgcggcgggcagccggagaaccat
tggctgatgcacctgatgtcgggcaacccgtccgaaccccggccggcgaccgatgagcag
ctgaaggcgctgcatgaacaggccgagcattccgaatccatggtctggcactccaaccgc
ggcgacgggaacgaagaggacggcgacgaaaccggcaccgagcgaaccgagccggagttc
ccgcccgagatcaagcccatgctggccagctcgtcggacaatcccaccttctccagaccc
gacgagtgggcattcgagatgaagtgggacggcgtccgggcgatctgctatctggcgggc
ggccgcgcgaggattctcagccggcgcggcctcgacgtcaccggaacctatccggagatc
gccgacgccctcgcgcggctcgacgtcgggaatgccgtgctggacggtgagatcgtcgcg
ctggacgagcagggccggccgagcttctcccgcttgcagaaccggatcaacctgagcggg
ccggcagatgtcagccgggcccgcagggaaacgcccgtccaactggtcatcttcgacatc
atgtatctcaacggccggtcgctggtgaaacagacctacgacgatcgacgtgccgaactg
gagaagttgatcaccggaggcaggattcagctgccgccgagtttcgacggtgatcaggag
gccgcccagatcgccagcaccagcctgggtatggagggaatggtcgccaagcgccgcagc
tccacctaccaacccggcggacgtggccagacctgggtcaagatcaagaacttccacacc
caggaggtcgtcgtcggcggctggcggcccggcaacggcaggcgttccggaaccgtcggg
tcactgctgatcggagtcccgatcgcgggtgatcacaagggtcggctgcgctacatcggc
cgcgtcggcagcggattctccgacgccgaactcggtcggatcaccaagctcatcgccggc
atgggacgggacgactcgcccctggaggacgtaccgcggctggatgcccgggacgcccac
tggatcgacccggacctggtcggggaggtcagctatgccgagtggaccggtgacggtcgg
ttgcgctttccggtctggcgtggctggcgaccggacaagagtcccgaagaagtcgtcgtc
gaggaatga

DBGET integrated database retrieval system