Methanocaldococcus infernus: Metin_0688
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Entry
Metin_0688 CDS
T01234
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mif03016
]
Metin_0688
Enzymes [BR:
mif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Metin_0688
Transfer RNA biogenesis [BR:
mif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metin_0688
Prokaryotic type
Metin_0688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADG13355
UniProt:
D5VS02
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All DBs
Position
623318..624604
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AA seq
428 aa
AA seq
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MKFLEKIRKEESLKNLIERRKRIFKRVRDEVIKEYLREMPLNLNKFLYNYYTGGIIKKYP
EDFIVEEITPDKKILEVGKSIEFKDVDNWKGSFIHFTLEKKNWTTLDAIREIANRLGVPR
KHFGFAGNKDKYAVTTQRVGCFNIKLEKLKSLKIKNIVLRDFQKVNWKIKLGDLWGNRFT
IRVREPEKDLENLEMSYFLNYYGIQRFGTTRPITHVVGKFIIERDWERAFYLYCGTPLRF
DDEKSRIARELVDEGEFKEAYKLFPRCFFYERKMIKRVIETGDYKKAFLILPPYLRCMFV
NAYQSYLFNELINRRYEYGFSPYEGDILINNIPTGALFGYKFEFASGLQGELERELFEEE
NLSREKFKIEDFGYFQGGRRKMLEKIYNLTYKVEENSYILRFCLKRGCYATSVLRELLRE
DYASYKVA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttagaaaagattagaaaagaggagagcttaaaaaacttaattgagagaaga
aagagaatttttaagagagttagggatgaagttattaaagagtatttaagggagatgccc
ttaaatctaaataaatttttatataactattatacaggaggaattataaagaagtatcct
gaggactttatagttgaggagataactcctgacaagaaaattttagaggttgggaagagt
atagagtttaaagatgttgataactggaaaggaagctttatacacttcaccttagaaaag
aaaaattggactaccttagatgctataagggagatagccaacaggttaggggttccaagg
aaacactttggctttgctgggaataaggataagtatgctgtaaccactcaaagagttggc
tgttttaacataaagttggagaagttgaagagcttaaaaataaagaatatagtgttaagg
gactttcaaaaggttaattggaaaatcaagttaggagatttatggggaaacagatttaca
ataagggttagagagcctgaaaaggatttagaaaatttagagatgagctattttttaaac
tactatggaattcaaaggtttgggacaacaaggcctataacccatgttgtaggcaaattt
atcattgagagagattgggagagagctttttatttgtactgtggaactccattaagattt
gatgatgagaagtcaaggatagcaagggagttagttgatgaaggagaatttaaagaagct
tataaacttttcccaagatgctttttttatgagaggaagatgattaagagggttatagaa
actggagattacaaaaaagcttttctaatcttacctccatatcttaggtgtatgtttgtt
aatgcctaccaatcttatttattcaatgagttaataaatagaagatatgaatatggcttc
tccccctatgaaggggatattttaattaataatattcccactggagccttatttggctat
aaatttgagtttgcctctggcttacagggggagcttgagagagagctatttgaagaagag
aacttaagcagggagaagtttaaaatagaggactttggctatttccaaggtggaaggagg
aagatgttagagaaaatatataacttaacttacaaggtagaagagaattcatatatttta
agattttgcttaaagagaggttgctatgccacctctgttttgagggaactgttgagggaa
gactatgcatcctacaaagttgcttag
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