KEGG   Methanotorris igneus: Metig_0316
Entry
Metig_0316        CDS       T01510                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mig  Methanotorris igneus
Pathway
mig03030  DNA replication
mig03410  Base excision repair
mig03420  Nucleotide excision repair
mig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metig_0316
   03410 Base excision repair
    Metig_0316
   03420 Nucleotide excision repair
    Metig_0316
   03430 Mismatch repair
    Metig_0316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mig03032]
    Metig_0316
   03400 DNA repair and recombination proteins [BR:mig03400]
    Metig_0316
Enzymes [BR:mig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Metig_0316
    6.5.1.6  DNA ligase (ATP or NAD+)
     Metig_0316
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Metig_0316
DNA replication proteins [BR:mig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metig_0316
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metig_0316
DNA repair and recombination proteins [BR:mig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metig_0316
   NER (nucleotide excision repair)
    Other NER factors
     Metig_0316
   MMR (mismatch excision repair)
    Other MMR factors
     Metig_0316
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: AEF95872
UniProt: F6BAQ8
LinkDB
Position
320895..322625
AA seq 576 aa
MLWKDVCEIYNKIENTTKRLEKRDYFIKLIDKVKHSGKPKDLKKICYLTIGRVFPEYDER
ELGIGSKLLIGAIVSTGIKEKELLEKIKETGDIGLAIEKLKSSIKQVSLFTKPLEVDEVY
ETLRKVAEIEGEQSQKKKLRHISSLFLRASPIESRYLARVILEDMRIGMNIPTIIEALSL
YFNVPKEKLERIYAVTNDIGLLAEKLMEEDLDSEELKLRVFRPIKPMLAQLVPSIKDAIN
EMKMPQFETKYDGARVQIHKKDGKVKIYSRRLEDVTNAIPEIREAIEKLEADNFIIEGEC
VAIDTSTGKPRPFQDILRRFRRKYDIDKMMKEINLRVYLFDVLYYKGREFIDLPLSERRK
TLEEILGIENDWRKDREKIERELKSKKIIDISYKLITDDVEEAEEFYKWSLGIGHEGVMI
KNLDAIYTPGSRVRTMYKFKPTLENLDVVITKAKRGMGKRKDWFGSYEISVRDEEGNLYS
IGHVGTGLTEDDLERLTKMINEIIIEDLGEEVVVEPKIVVEVAYEEIQKSDKYPCGYALR
FPRIVRFREDKSVNDINTLDDVKRIYEIQHKAVETV
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgttatggaaggatgtctgtgagatatataacaaaatagaaaacactacaaaaagattg
gagaaaagggactattttataaaattaattgacaaagttaaacatagtggaaaacctaaa
gatttaaagaaaatttgttatttaacaattggaagggtttttccagaatatgatgagaga
gaactgggaataggttcaaagttattaattggtgctatagtatcaactggtataaaggag
aaggaattattggaaaaaataaaagaaactggagatattggtttggcaatagagaaattg
aagtcaagcataaagcaagtatctttatttaccaagcccctcgaagttgatgaggtttat
gaaacactgagaaaagttgctgaaattgagggggaacaatcccaaaagaagaaacttaga
catatatcaagtttatttttgagggcgagccctattgagagtagatatttggcaagggta
attttggaggatatgagaattggaatgaacattccaacaattattgaggcattatcgctc
tatttcaatgttccaaaagaaaaattagagagaatttacgcagtaacaaatgacattgga
ttgttggcagagaagttaatggaagaggatttggatagtgaagagttgaaactaagggta
tttagacctataaagccaatgttagctcaattagtgccatcaataaaggatgcaataaat
gagatgaagatgccccaatttgagacaaagtatgatggtgcaagggtgcaaatccacaaa
aaagatggaaaagttaagatttacagtaggaggttagaagatgttacaaacgctatccca
gaaataagagaggcaattgaaaaattggaagcagataactttataattgaaggggagtgt
gtagcaattgatacatcaactggaaaaccaagacctttccaagatattttaaggaggttt
aggagaaagtatgatattgataaaatgatgaaggaaataaacttgagggtttatcttttt
gatgttttatattataagggtagagaatttattgatttgcctctaagtgaaaggaggaaa
acattagaagaaattttaggcatagagaatgattggagaaaagatagagaaaagattgaa
agagaactcaaatccaaaaaaatcatcgatatatcatacaaattgataactgatgacgtt
gaggaggcagaggaattttataagtggagtttaggtattggtcatgagggtgtgatgatt
aagaatttagatgccatctacactcctgggagtagggtaaggacgatgtataaatttaaa
cctacattagagaatcttgatgttgtaataacaaaggcaaagaggggaatgggtaaaaga
aaggattggtttggttcttatgaaatatctgttagggatgaggaggggaatttatattca
attgggcatgttgggactggtttaacggaggacgatctggagagattaacgaagatgatc
aacgaaataattattgaggatttaggagaggaggttgtcgttgagccaaagattgttgtt
gaagttgcttatgaggagattcaaaaatcagataagtatccctgtggttatgctttaaga
ttcccaagaatcgttaggtttagagaagataaatctgtaaatgatataaacacattagat
gacgtcaagagaatttatgaaattcaacataaagccgttgagactgtttaa

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