KEGG   Mycoplasma iguanae: NV226_02560
Entry
NV226_02560       CDS       T08523                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
migu  Mycoplasma iguanae
Pathway
migu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:migu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NV226_02560 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:migu03400]
    NV226_02560 (uvrB)
DNA repair and recombination proteins [BR:migu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NV226_02560 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NV226_02560 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR Flavi_DEAD AAA_19 Helicase_C_2 AAA_30 AAA_22 Glyco_tran_WecG Herpes_ori_bp UvrD-helicase LSDAT_prok TrwB_AAD_bind AAA_7 AAA AAA_16 YqaH Microtub_bd DUF2009
Other DBs
NCBI-ProteinID: UVD81585
LinkDB
Position
complement(553568..555544)
AA seq 658 aa
MYKLVSNYHPSGDQPKAIEQLVKGINEKKQHQVLLGVTGSGKTFTIANVIAQTNRSVLVL
SHNKTLASQLYSELKEFFPENKVEYFVSNFDYYRPEAYLPRKDVYVEKTSKTNMDLEAMR
MSSLNSLLSYPNTIVVSSVAAIYGALNPAEYRDNFYHIETGMVINRQEFFLSLTKINYQR
NDIDLVPGTFGAKGDVVEIAPGWTAEYILRIEFFGDEIESISKIEPLTKNVIKRYKNYLI
YPASAYTAKQTTMEKAIKTIYEELVERLDQFQKEGKLLEKQRLEERTKNDIDSIQEFGFC
SGIENYSRHMDGRQKGERPYTLLDYLPKDALIIIDESHITIPQIGGMYAGDYSRKKNLVD
YGFRLPSALDNRPLTFEEFEKFDFQRIYISATPADFELDKTAGEIVSQIIRPTGLLDPII
EIHPTLNQFENIFDRLQEQKQKKERTLILTSTKRVAEELAKALQEKNQKVAYIHSEHKTF
ERNEILRKLRKGIHDAVIGINLLREGIDLPEVSLILVLDADKEGFLRSKKSLIQIAGRAA
RNDHGKVIFYADKITKAMQDAIDDNQYKRKIQQEYNEKHHIIPQTIIKPIAEPIQGHDIT
NSVNFFLESGKAKKKNKKEFEKLLDSLRKQMNEAAKNKEFERAIELRDTIIELEVENS
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgtataaattagtatccaactatcatccttcaggtgatcagcctaaagctattgaacaa
ttagttaagggaattaatgaaaaaaaacaacaccaagtattgcttggtgtgacaggtagt
ggaaaaacttttactattgcaaatgtaatagcacaaacaaatagatctgtgctagtttta
tctcataataaaactctagcttcacagttgtattcagaattaaaagagttttttccagaa
aacaaagtggaatattttgtttctaattttgattactatcgacctgaagcttatttgcct
cgaaaagatgtttatgtagaaaaaacttctaaaactaatatggatttagaggcaatgcga
atgtcttctcttaattcattactttcatatcccaatacaattgtggtttcctctgtagct
gccatttatggggctttaaatccagcagaatatcgtgataatttttatcacattgaaaca
ggaatggttattaatcgtcaggaattttttttaagtttaactaagattaattatcaaaga
aatgatattgatttagttccaggaacttttggagctaaaggtgatgttgtcgaaatagca
cccggatgaactgcagagtacattttaagaattgagttttttggagatgaaatcgaatca
atttccaaaattgaaccattaactaaaaatgttattaaaagatacaaaaattatttaatt
taccctgctagtgcttatactgctaaacaaaccacaatggagaaagctattaaaactatt
tatgaagaactagttgaaagactagatcaatttcaaaaagaaggaaaattgcttgaaaag
caaagactagaagaaagaactaaaaatgatattgattcaatacaagaatttggtttttgt
agtggcattgaaaattattcaagacatatggatggtcgtcaaaaaggcgaaagaccttac
acccttttagattatttacctaaagatgcactaattattattgacgaatcacacattaca
attccccaaattggaggaatgtatgcaggagattattccagaaagaaaaatcttgtagat
tatggttttcgtttaccttcagctttagataatcgccccttaacttttgaggaatttgaa
aaatttgattttcaaagaatttatatttctgctactccagcagattttgaattagataaa
actgctggagaaattgtttcgcaaattattcgtcctacaggattattagatcctatcatt
gaaatacatccgacattgaatcaatttgaaaatatctttgatagactccaagaacaaaaa
cagaaaaaagaacgaactttaattttaacttccacaaaaagagtagctgaagaattagct
aaagcattacaagaaaaaaatcaaaaagtagcttatattcattcagaacataaaactttt
gaacgtaatgaaattttaagaaaattacgtaaaggaattcatgatgcagtgattggaatt
aaccttttaagagaaggaatagatttacctgaagtttcattaattttagttttagatgct
gataaagaaggatttttaagatcaaaaaaatcattaattcagattgctggtcgtgcagcc
agaaatgatcatggaaaagtaattttttatgctgataaaataacaaaagcaatgcaagat
gctattgatgataatcagtataaaagaaaaattcaacaagaatacaatgaaaaacatcat
attattccccaaacaattattaaaccaattgctgaaccaattcaagggcatgatattact
aattcagttaatttctttttagaaagcggtaaagctaaaaagaaaaataaaaaagaattt
gaaaaattattagatagtttacgcaaacaaatgaatgaagcagctaaaaataaagagttt
gaacgagcaatcgaattacgtgatactattattgaactagaagtggaaaattcataa

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