Microbacterium sp. BH-3-3-3: BJP65_13535
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Entry
BJP65_13535 CDS
T04827
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03030
DNA replication
mih03430
Mismatch repair
mih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP65_13535
03430 Mismatch repair
BJP65_13535
03440 Homologous recombination
BJP65_13535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mih03032
]
BJP65_13535
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_13535
Enzymes [BR:
mih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP65_13535
DNA replication proteins [BR:
mih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP65_13535
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP65_13535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_14
DEAD
Rad17
DnaX_C
GLTT
AAA_16
AAA_28
AAA_18
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AOX46690
LinkDB
All DBs
Position
2931086..2934142
Genome browser
AA seq
1018 aa
AA seq
DB search
MTTALYRRYRPQAFGEMIGQSQVTDPLMTALRSDRVGHAYLFSGPRGCGKTTSARILARC
LNCAAGPTDTPCGVCDSCVELGRGGGGSLDVVEIDAASHNGVDDARDLRERAIFAPARDR
FKIFILDEAHMVTQQGFNALLKLVEEPPAHVKFIFATTEPEKVLGTIRSRTHHYPFRLVP
PAAMLEYVQELCETEGVAVEAGVLPLVVRAGGGSPRDTLSLLDQLIAGSDPSTGSETAQA
GQVLVRYERAVALLGYTHSELLDEVVDAFAANDGAGAFASIDRVVQTGQDPRRFVDDLLE
RLRDLIIVAATGAGAAAVLRGVPDDELERMSRQATAFGTARLSRTADLVVAALDEMTGAT
SPRLQLELLVARVLTHAGVSQGTSPATAHDVEASRTSAPATGRPASPAGEIAAPAASQSA
AAPSSGAPSSGAPSPAAPRVASPGAASPRVASPGASAPGVANPGTASSGAGAAPTRVTAP
VAAPGIASPGIASPNVASPGIASPGIASPSVASSGVASPTVAAPGSAAPAVASPGAAQPP
RSTPTPAPASSTSDDDAPPPFTDDDAPPPYGDDDGAPVDTGSFRSGARSGAGRATASASS
TAPAAETDEPVTSRPTTAASSPPAAASDTTSPSSAGSRPAPAEEAHPFDTAPTAADDASD
VDAFPAAPIDTGSADAADAPATEAPAADAPATEVPTAEAPAAEAPAPDAPAAEAPTAEAP
AQTAPATDALTTDAPDASAAPEASPLEPSAPTLPATPVGPIELGHVRDAWPEVLGQLEVA
SRSSWLVVSTSTVAAFDDDVLTLSFRTASDLGAFKTRTPEGGPSEDLRQAIQAVLGVRVK
YLARLEGDPPGSGGAGPGRPGGPSRGPASPPPPSASPSGARSSAPYASSVTEWAVAPIPT
SGGAAPEAQRAPIAPTTALAVDDEPADAAGSAEAVVVREGAVLPPRDVVASVPAPDEVDD
DDVIPPADEVEAPLPPVVVPRMAPLGGGVQRYGEAVVRQMLSATYVRDEPYEPPTRFN
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacagccctgtaccgccgataccgcccgcaggcgttcggcgagatgatcgggcag
tcccaggtgaccgacccgctcatgaccgccctgcgcagcgaccgggtcggccacgcctac
ctgttctcgggtccgcgcgggtgcggaaagaccacctcggcccgcattctcgcccgctgc
ctcaactgcgcggccggtcccaccgacaccccgtgcggcgtctgcgacagctgcgtcgag
ctcggtcgtggcggaggaggatcgctcgacgtcgtcgagatcgacgcggccagccacaac
ggtgtcgacgacgcgcgcgacctgcgcgaacgcgccatcttcgcgccggcccgcgatcgc
ttcaagatcttcatcctcgacgaggcccacatggtcacgcagcagggcttcaacgctctg
ctcaagctcgtcgaagaaccccccgcgcacgtgaagttcatcttcgccaccaccgagccc
gagaaggtcctcggcaccatccgctcgcgcacgcaccactacccgttccggctggttccg
ccggcggccatgctcgagtacgtccaagaactctgtgagaccgagggcgtcgccgtcgag
gccggggtcctgccgctcgtcgtccgagccggcgggggatccccgcgtgacacgctctcg
ctgctcgatcagctcatcgccggatccgacccctcgacggggtccgagaccgcgcaggcc
ggacaagtgctcgtgcggtacgaacgcgccgtcgccctgctggggtacacccactcggag
ctgctcgacgaggtcgtcgacgcgttcgccgcgaacgacggcgccggcgccttcgcctcc
atcgaccgcgtcgtgcagaccggccaagacccccggcgcttcgtcgacgatctgctcgag
cgtctgcgcgatctgatcatcgtcgccgccaccggggccggagccgcggccgtcctgcgc
ggtgtccccgacgacgagctcgagcgcatgtcgcgtcaggccaccgctttcggtaccgcg
cgtctgtcgcgcacggccgacctcgtcgtcgccgccctcgacgagatgacgggggccacg
tcaccgcgtctgcagctcgagctgttggtcgcgcgcgtgctcacccacgccggggtgtcg
cagggcacgtctcccgccaccgcgcacgacgtcgaagcctcgcgcacctccgcaccggcg
accgggcgtcccgcctcgccggcgggcgagatcgccgcgccggctgcttcccagtcggct
gccgccccgtcatctggcgccccgtcgtctggcgccccgtcgcctgccgctccgcgcgtt
gcttcgccgggtgcggcgtcgccccgcgtcgcttctccgggcgcatccgcgccgggggtc
gcgaaccccggcaccgcctcgtcgggcgccggcgcggctcccacgcgcgtcaccgcgccg
gttgccgcaccgggcatcgcgtcacccggcatcgcttcgccgaacgtcgcgtcgccgggc
atcgcctcgccgggcatcgcctcacccagcgtcgcgtcgtcgggagtcgcctcgccgacg
gtcgccgcgcccggatccgcggcacccgccgtcgcgtcgccgggagccgcacagccgccg
cgttccaccccgaccccggcgcccgcgtcgagcacgtccgacgatgacgcgccgccgccg
ttcaccgacgacgatgctcctccgccctacggcgacgacgacggtgcgccggtcgacacc
gggtcgttccggtccggtgctcgttcgggagcaggtcgcgcgacggcttcggcttcgagc
acggcccccgcggccgaaaccgatgagccggtgacgtcccgtccgacgacggccgcgagc
tcgcctcccgcggcggcgtccgacaccacgtcaccttcgtccgccgggtcgcgccccgcg
ccggccgaagaggcgcacccgttcgacacggcgccgacggccgccgatgacgcatccgac
gtcgacgcgttcccggccgcccccatcgacaccggttcggccgacgcggcggatgctccc
gcgacggaagcccccgcggcggatgctcccgcgaccgaagtccccacggcggaagccccc
gcggcggaagcccccgcgccggatgctcccgcggccgaagcccccacggcggaagctccc
gcacagacggcaccagcgacggatgccctcacaacggacgcgcccgacgcctcggcggcc
cccgaggcatcgccgctcgaaccgtcggcccccaccctgccggccacgcccgtcgggccg
atcgagctgggccacgtgcgtgacgcgtggcccgaagtgctcggccagctcgaggtggcg
agccgctcgtcgtggctggtggtctcgacgtcgaccgtcgccgccttcgacgacgacgtg
ctcacgctgtcgttccgcacggcgagcgacctgggtgccttcaagacgcggacccccgag
ggcggcccgagcgaagacctccgccaggccatccaggccgtgctgggcgtgcgggtgaag
tacctcgcccgtctcgagggcgacccacccggttccggtggtgcgggtccgggccgcccc
ggtggaccctcccgtggccccgcgagccccccgcccccgtcggcgagcccatcgggcgcg
cggtcgtcggcgccgtacgcgtcatcggtcaccgagtgggccgtcgctcccatccccacg
tcgggtggggccgctcccgaggcgcagcgtgcgccgatcgcccccacgacggctctcgcc
gtcgacgacgaaccggccgacgcggcgggctcggccgaggcggtcgtcgttcgcgagggc
gccgtccttccgcctcgcgatgtcgtggcctcggtgccggcccccgacgaggtcgacgat
gacgacgtcatcccacccgccgacgaggtcgaggcgccgctgccgcccgtcgtcgtgccg
cgcatggcaccgctcggcggtggcgttcagcgctacggcgaggcggtcgtccgccagatg
ctcagcgccacctacgtgcgcgacgagccctacgagcccccgacgaggttcaactga
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