KEGG   Microlunatus elymi: FOE78_14435
Entry
FOE78_14435       CDS       T06101                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mik  Microlunatus elymi
Pathway
mik03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mik00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FOE78_14435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mik03400]
    FOE78_14435
Enzymes [BR:mik01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FOE78_14435
DNA repair and recombination proteins [BR:mik03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FOE78_14435
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C RNA_ligase DNA_primase_S DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: QDP96955
UniProt: A0A516Q0K4
LinkDB
Position
3226166..3228745
AA seq 859 aa
MAAEQEQSQTVSVDGMLLKISNLDKVLYPATGTTKGDVIAYYTEIAPIMVPHLNGRPVTR
KRWVHGVGTEAEPGAVFFQKNLDPRSTPDWVRRFAIEHRSGTNEYPIVNDLATLAWLAQL
ASLEIHVPQWRFDRDGSVGNPDRLVLDLDPGPGVGLAECAQVAHWARDALQAVGLELFPV
TSGSKGIHLYAHLDGSHSSADASKIAKELARSLQSVHPELVVSEMAKAQRKGKVFIDWSQ
NNANKTTISPYSLRGRMRPTVAAPRTWDELDEDLEQLDYEELSARVGELGDLLAPLIPAE
VDGPVAADSGARDRASVDRLAKYRSMRDPDRTPEPVPAEAPQVRDGDQPMFVIQEHHARR
LHYDFRLEHDGVLVSWAVPKGVPTGTKTNHLAVQTEDHPIEYGSFSGIIPQAEYGGGEVI
IFDTGTFELEKWRDGREVIATLNGTKPGGVGTDCKIALIHTGGRGGQPENHWLMHLMSGS
PTEPVPATPDELTALHEQAARDDDLVWHSNRDEDAGPENPKPARVSEPVEGPSSVVDFPP
EIKPMLASTAEETDFSDERDWAFEMKWDGVRAVCYLAGGQAKILSRRGLESSVSYPEIVD
ALSGIAVDNAILDGEIVALDDHGRPSFSRLQNRMNLTQPTDVARARRTTPVQLVIFDVLY
LDGRSLVKEHYVDRRRRLQELITDGGRIQVPPSFDGDLETALSASESLGLEGVVAKRRTS
IYQAGSRGRTWLKIKNFKTQEVVVGGWRDGNGRRAGTVGALLIGVPDEVGRLRYAGRVGS
GFSDAELERIAKQFRSMARDDCPLDDVPRIDTRDAHWIEPRLVGEVSYGEWTDDHRLRHP
VWRGWRPDKTPDDVRMEPN
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggccgccgagcaggagcagtcgcagaccgtttcggtcgacggcatgctgctcaagatc
agcaatctggacaaggtgttgtacccggcgaccggcaccaccaagggcgacgtgatcgcg
tactacaccgagatcgcgccgatcatggtgccgcacctgaacggccggccggtcacccgc
aaacgctgggtgcacggggtcggcaccgaggccgagccgggcgcggtcttcttccagaag
aatctcgatccgcggtcgacgccggactgggtgcgccgcttcgcgatcgagcatcgcagc
ggaaccaacgaatacccgatcgtgaacgatctggccacgcttgcctggttggcccagttg
gcctcgttggagatccacgtgccgcagtggcgattcgaccgagacggatcggtcggcaat
ccggaccggctggttcttgatcttgatcccggtccgggcgtcggtctggccgagtgcgcg
caggtggcccactgggcccgggatgccttgcaggctgtgggtctggagctgttccccgtc
accagtggcagcaagggcatccatctctacgcgcacttggacggcagccacagttcggcc
gacgcgtccaagatcgccaaggaacttgcccgatccctgcagtcggtgcatcccgagctg
gtggtctcggagatggcgaaggctcagcgcaagggcaaggtcttcatcgactggagccag
aacaacgcgaacaagaccaccatctcgccgtactcgctgcggggccggatgcggccgacg
gtcgccgcgccgaggacctgggacgagctggacgaggacctggaacagctggactacgaa
gaactgtcggcacgggtcggcgagctcggtgacctgctggctccgctgatcccagccgag
gtcgacgggccggtcgcggccgactccggcgcgcgcgaccgggcgtcggtcgatcggctg
gccaagtatcggagcatgcgcgacccggaccgtacgccggaaccggtgccggccgaggcg
ccccaggtccgcgacggcgatcagccgatgttcgtcatccaggagcaccacgcccgccgg
ttgcactacgacttccgactggagcacgacggcgtgctggtcagctgggcggtgccgaag
ggggtgccgaccggcaccaagacgaaccatctggcggtgcagaccgaagatcatccgatc
gagtacggcagcttctccgggatcatcccgcaagccgagtacggcggcggcgaagtgatc
atcttcgacaccgggacgttcgaactggagaagtggcgcgacggccgggaggtgatcgcc
actctcaacggcaccaaacccggcggcgtcggcaccgactgcaagatcgcgttgatccac
accggtggtcgcggcgggcagccggagaaccactggctgatgcacctgatgtccggctcc
cccaccgagcccgtgccggcgacaccggacgagctgacagcgctgcacgagcaggcggct
cgtgatgatgatcttgtctggcattccaatcgcgacgaggacgccggacccgagaatccc
aagccagcaagggtttctgagcctgtcgaaggaccgtcgagcgtcgtggattttccgccc
gagatcaaaccgatgctcgccagcacggcggaggagaccgacttctccgacgagcgcgac
tgggcgttcgagatgaagtgggacggcgtacgggcggtctgctatctggccggcgggcaa
gcgaagatcctcagccggcgcggactggagagttcggtcagctaccccgagatcgtcgac
gcactgagcgggatcgcggtcgacaacgcgatcctggacggcgagatcgtcgccctcgat
gatcatggtcggccgagtttctcccgcctgcagaatcggatgaacctgactcaaccgacc
gatgtcgcccgggcccggcggaccacacccgtgcagttggtgatcttcgacgtcctttac
ctggacggccgttcgctggtcaaggagcactacgtcgaccgacgccgccggctgcaggag
ttgatcaccgacggcggccggatccaggtgccgccgagcttcgacggtgatctcgagacg
gcactgtccgccagcgaatccctcggcctggaaggcgtggtggccaagcgccggacgtcg
atctaccaggccggcagccgtgggcgtacctggctcaagatcaagaacttcaagacccag
gaggtcgtggtcggcggttggcgggacggcaacggtcgccgcgccggcaccgtcggcgcg
ctgctgatcggcgtcccggacgaggtcggccggctgcgctatgccggccgggtcggcagc
ggcttctccgacgccgagctggaacggatcgcgaagcagttccgttcgatggcccgggac
gactgcccgctggacgacgtaccgcggatcgatacccgcgacgcccactggatcgaaccg
aggttggtcggcgaggtcagctacggcgaatggaccgatgatcaccgcctccgccacccg
gtctggcgcggctggcgccccgacaagaccccagacgacgtccggatggagccgaactga

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