Mangifera indica (mango): 123193718
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Entry
123193718 CDS
T07684
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123193718
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
minc01002
]
123193718
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123193718
Enzymes [BR:
minc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123193718
Peptidases and inhibitors [BR:
minc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123193718
Ubiquitin system [BR:
minc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123193718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
123193718
NCBI-ProteinID:
XP_044462735
LinkDB
All DBs
Position
12:6122529..6137593
Genome browser
AA seq
1115 aa
AA seq
DB search
MTLMTPPPLDRQEDDDMLVPHTDFAEGPQPMEAQAETASTVDAQAVDDPPSARFTWTIEN
FSRLNTKKLYSDVFYVGGYKWRILIFPKGNNVDHLSMYLDVADATTLPYGWSRYAQFSLA
VVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNETCVVEADVAVRR
VVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIP
LALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN
KYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRQN
GKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKR
ALEEQYGGEEELPHANPGFNNSPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLR
IRLKKEQEEKEQKRKEKAEAHLYTIIKVARSEDLLQQIGKDIYFDLVDHEKVHSFRIQKQ
IPFNLFKEDVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKAS
SVELKLFLEVEFGQDLRPIPLPDKTKEDILLFFKLYDPVKEELRYVGRLLVKGTGKPTEI
LTKLNEMAGFAPDEDVDLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKLSQAAS
GEQCRYPDVPSFLDYVHNRQVVRFRSLEKSKEDEFFLELSKGHNYDDVVERVAQHLGLDD
PSKIRLTSHNCYSQQPKPQPIKYRGVERLSDMLVHYNQTTDILYYEVLDIPLPELQGLKM
LKVAFHHATKDEVMIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIYKIF
PLSEKIENINDQYWTLRAEEIPEEEKNFGPLDRLIHVYHFMKDTAQNQVQVQNFGEPFFL
VIREGETLAEVKVRIQKKLQVPEEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGA
WEQYLGLEHTDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgacccctccaccattagatcgtcaggaagacgatgatatgctggttccc
cacactgactttgctgaaggtcctcagccaatggaagcacaagcagaaactgctagtaca
gttgatgcccaggcagttgatgatccgccatctgcaagattcacttggacaattgagaat
ttttcgagacttaataccaagaagctttactctgatgtgttctatgttggaggttacaag
tggcggattctcatctttccaaaggggaacaatgtggatcatttgtcaatgtatctagat
gttgcagatgcaacaactttgccatatgggtggagtagatatgctcagttcagcttagct
gttgtcaatcagattcacagcaaatattcaattagaaaagacacgcagcatcagtttaat
gcacgggaaagtgactggggttttacttcatttatgcctcttggtgaattgtatgacccc
agtagaggttatcttgtaaatgagacttgcgtagttgaggctgatgttgcggttcgaaga
gttgttgattattggtcacatgactccaaaaaggagactggttatgttggacttaagaac
caaggagctacttgctacatgaactctctccttcaaacactgtatcatattccttacttt
agaaaggctgtgtatcatatgccaacaactgaaaatgatatgccatcagggagcattcct
ctggcattgcagagtttgttttataagctccagtacagtgatacaagtgtagcaacaaaa
gagttgaccaaatcttttggatgggacacatatgactctttcatgcaacacgacgttcaa
gaacttaatagggttctttgtgagaaactcgaagataaaatgaagggaactgttgtggag
ggcacaatacagcaattgtttgaaggtcatcacatgaactacattgaatgcatcaatgtg
gactataaatcaacgagaaaggagtccttttatgatcttcagcttgatgtcaaaggctgt
cgagatgtttatgcttcttttgacaagtatgtggaagtggaacgccttgaaggggacaat
aaatatcatgctgagcaacatgggttgcaggatgctagaaagggtgtcttgttcattgac
tttcctcctgtccttcaactacagttaaaacggtttgagtatgattttatgcgggatact
atggtaaagataaatgatcgatatgagttcccattgcaacttgatcttgatagacaaaat
ggaaaatatttgtcccctgatgcagacagaagtgttcgcaatctgtacactcttcacagt
gttttggttcacagtggtggagtacatggtgggcactactatgcttatatcaggccaacc
ctttcagatcaatggttcaagtttgacgatgaacgggtaacaaaagaggatataaaaagg
gcattggaggagcagtatggtggtgaggaggagttaccacatgcaaatcctggattcaac
aattctccatttaaatttacaaaatactcaaatgcatatatgcttgtgtatatacgtgaa
agtgacaaagacaaaattatctgtaatgtggatgagaaagatatagctgagcacctgagg
ataagattgaagaaagaacaagaggaaaaggagcaaaaaagaaaggaaaaagcagaggca
cacttgtatactattataaaggtcgcacgtagtgaggatctacttcaacagattggaaag
gatatatactttgatcttgtagatcatgaaaaagttcatagttttcgtattcagaaacaa
attccctttaaccttttcaaggaagatgttgctaaggagtttggaatcccagtgcaattt
caacgtttttggctgtgggcaaagcggcagaaccatacttatcgccctaatcgaccactg
actccccaggaggaagcacaatcagttggtcaattaagagaggtttcgaataaagcaagt
agtgtagagctaaagttgtttctggaagtagaatttgggcaggatttgcgccctattcct
ctgcctgacaaaactaaagaggatattcttctattctttaaactttatgatccagtgaaa
gaggagctccggtatgttgggaggctattagtgaagggtactggtaagccaactgaaata
ttgacaaaactaaatgaaatggctggatttgcgcctgatgaagatgttgacctttatgag
gaaataaagtttgaaccaaatgttatgtgtgaacctattgacaagaaactcacatttcgt
gcaagtcagcttgaagatggggacataatttgtttccagaagctttctcaggctgcaagt
ggagaacaatgccgctacccagacgttccttcatttttggattatgtgcataaccgtcag
gttgttcgctttcggtctttggagaagtcaaaggaggatgaattcttccttgagttgtca
aagggtcacaattatgatgatgtagtggaaagagtagctcaacatcttggattggatgat
ccatccaagattaggcttacatctcataactgttactcccagcagcccaagcctcaacct
ataaagtacagaggagtggaacgcttgtctgacatgcttgtccattacaatcagactacg
gatatactgtattatgaagtactggatattcctttgccggaacttcaaggcctgaagatg
ttgaaggttgcttttcatcatgctacaaaggatgaagttatgattcatacaattagattg
ccaaaacagagcactgtaggtgatgtgatcaatgacctcaagacaaaggtcgagttgtct
catcctgatgctgagcttagattgcttgaagttttctatcacaagatttacaagattttc
ccacttagtgagaagattgagaatattaatgaccaatactggaccttacgtgctgaggag
attccagaagaggagaaaaacttcggtcctcttgatcgactgattcatgtttatcatttt
atgaaagacacagctcaaaatcaagtgcaggttcaaaattttggggaaccgtttttcctt
gttattcgtgagggagaaacgttagctgaagttaaagtgcggatccagaaaaaattgcag
gttccagaagaagaattctcaaagtggaagtttgcatttttgtcactgggtcgacctgag
tatcttcaggactctgacattgtatctagtcgttttcagcgaagggatgtttatggtgct
tgggagcagtatcttggattagaacacacagacaacgcccctaagaggtcatatgcagcc
aatcagaaccgtcacacgttcgagaagccagtaaaaatctacaattag
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