Mangifera indica (mango): 123202795
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Entry
123202795 CDS
T07684
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123202795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123202795
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123202795
Spliceosome [BR:
minc03041
]
Complex A
U2 snRNP components
U2 related factors
123202795
Complex B
123202795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123202795
NCBI-ProteinID:
XP_044474863
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All DBs
Position
19:complement(12381526..12386241)
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AA seq
1147 aa
AA seq
DB search
MEETKHESKRSRRERDRDKEKERNGERHSDKRDRESRRSEREKSTDSDDKHDKGKERDKH
RDKDKDRRNRDEGKDRSSDRKRDREKEREKEKEREEKRERAREKERGRERERDKKDRDRE
DRERERDRERERKERDRERDREREKRERERDREREKERERRLRDREKHRKVDSDDSDEDK
EHDRKRHKRDDDDDYKERVHEQSVRSNRHRDGSEDSPRKRVVEDDFDKKEKKTREEELED
EQRKLDEEMEKRRRRVQEWQELKRKKEESEREKHGGESVDEPKAGRKWTLDGEDSDDEVP
QTGKSETEMDPDEDANPSDKQVGDAMVVDAESGNAAPVLQNGVAGEEEIDPLDAFMNSMV
LPEVEKLNNAVELLVADANGVDPKRKDRKGDRINVEQPKRGSNKSLGRIIPGEDSDSDYE
DLENDEETVEDEDDAEFMKRVKKTKAEKLSIVDHSKIDYKPFRKNFYIEVKEISRMTPEE
VVAYRKQLELKIHGKDVPKPIKTWHQTGLTSKIMETIKKLNFEKPMPIQAQALPVIMSGR
DCIGVAKTGSGKTLAFVLPMLRHIKDQPPVIAGDGPVGLIMAPTRELVQQIHSDIRKFAK
VMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYFVMDE
ADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN
KDITQLVEVRPESERFLRLLELLGEWYEKGKILIFVHSQEKCDVLFKDLLRHGYPCLSLH
GAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDAPNHYEDYVHRVGRT
GRAGRKGCAITFISEEDARYAPDLVKALELSEQVVPDDLKAVADSFMAKVNQGLEQAHGT
GYGGSGFKFNEEEDEKRKAAMKAQAKEYGFEEDKSDSEDEDEGVRKAGGDISQQDALAKI
AAIAAATKASVPMPTPISAAQMLPNAGLPISLPGVLGLPIPGAAPVVPGTGLSVVPNDGA
ARAAALAAAINLQHNLAKIQADAIPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGA
AITTRGQYFPPSRVTGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTNQALSLPGGAQ
PGRYSVV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgaaacatgaatcgaagaggagtcgccgggaacgtgacagggataaagag
aaggagagaaatggagagagacacagtgataagagagacagggaaagtaggcgttctgag
agagagaaaagcactgattctgatgacaagcatgataaagggaaagagagagataagcat
agagacaaggataaggatagaaggaacagggatgaaggaaaagatagaagcagtgatagg
aagagagatagagagaaggagagggagaaagagaaagaaagagaggagaagagggagagg
gcaagggagaaagaacgagggagggaaagagaaagagataagaaggaccgtgaccgtgaa
gatagagagagggaaagggatagagaaagggagaggaaggaacgagatagggagagagat
agagagagagaaaagagagagcgtgagagagatagagagagggaaaaagagagggagcgg
agattgcgtgatcgggagaagcatagaaaagttgatagtgatgatagtgatgaagacaaa
gaacatgatagaaagcggcacaagagagatgatgatgatgattacaaggagagagtgcat
gaacagagtgttagatcaaacaggcaccgggatggcagtgaagatagcccaaggaaaaga
gttgttgaggatgattttgacaagaaagagaagaaaactcgagaagaagagctagaagat
gaacagcggaaattggatgaggaaatggaaaagcggaggaggagagttcaggaatggcaa
gagttgaagaggaagaaggaagaatctgaaagagaaaagcatgggggagagagtgttgat
gaacccaaggctggcaggaagtggacccttgatggagaagattctgatgatgaagtaccc
caaactggaaaatctgagacagagatggatccagacgaagatgccaatccttctgataaa
caagttggagatgcaatggtggtagacgctgagagtgggaatgcagcacctgtcttgcaa
aatggggttgctggcgaggaagaaatcgatccacttgatgcttttatgaactctatggtt
ttacctgaagttgagaagctaaacaatgctgtggaattgttggtggcagatgctaatggt
gtggacccaaagaggaaggatcgaaagggtgataggattaatgtcgaacagccaaagaga
ggttcaaataagtctcttgggagaataattcctggtgaagattctgattcagattatgag
gaccttgagaatgatgaggaaacagttgaagatgaagacgatgctgaatttatgaagaga
gtaaaaaagacaaaagctgagaaattatctattgttgaccactcaaaaattgattacaaa
cctttcaggaaaaatttctatattgaagtgaaggaaatttcaagaatgactcctgaagag
gttgttgcatacaggaaacaactggaattgaaaatacatggaaaggatgtcccaaaacca
atcaaaacctggcaccaaactgggcttacaagcaaaattatggagacgataaagaagctt
aactttgaaaagcctatgccaatccaagctcaggcactaccagtaattatgagtgggcga
gattgcataggcgttgcaaaaactgggtctggaaagacccttgcctttgtgttgccaatg
ttgaggcatataaaggaccagccacctgtgatagctggggatgggccagttggacttata
atggcacctacaagggagcttgtccagcagatccacagtgatatcaggaagtttgccaag
gtaatgggtatcagatgtgtgcctgtctatggtggttctggtgttgctcagcaaattagt
gaattaaaacgagggactgaaattgttgtttgtactccaggtcggatgattgatatactt
tgcacaagcggagggaaaattaccaatttgagaagagtcacttattttgtcatggatgaa
gctgatagaatgtttgacatgggttttgaacctcagatcactcgaattgttcaaaatatt
aggccagatcgccaaactgtactattttctgctactttcccacgccaggttgaaattttg
gcacgcaaggttttgaacaaacctgtggagattcaggttggtggcagaagtgttgtaaac
aaagacataacacagttggttgaagtgaggccagaaagtgagagatttttaagactgtta
gaactactaggtgaatggtatgagaaaggaaaaattttgatatttgtccactcacaagaa
aaatgtgatgttttatttaaggatttgcttagacatggttatccatgtctttcactacat
ggggcgaaggatcagacagatcgcgagtccactatttccgatttcaagagcaatgtctgc
aatttgttgattgcaactagtgttgcagctagaggtttagatgtgaaagagcttgaatta
gtgataaactttgatgctccaaaccactatgaggattatgtacaccgtgttggtaggaca
ggtcgagctggtcgaaaaggctgtgcaatcacatttatctctgaggaggatgcaagatat
gcaccagatcttgtgaaggcattagagctttctgagcaagttgttcctgatgatctgaaa
gctgtcgctgatagtttcatggcaaaagtgaatcagggacttgagcaagcccatggaacg
ggttatggtggaagtggttttaaatttaatgaggaggaggatgagaagaggaaagctgca
atgaaagcacaggcaaaagaatatggctttgaggaagataagtcagactcagaagatgaa
gatgaaggggtgcggaaggcaggtggtgacatctcgcaacaagatgcgcttgctaagatt
gcggctattgctgctgccactaaagcctcagtgccaatgccaactcctatctcggctgcc
caaatgcttcccaatgctggactacccatttctctgccaggtgttcttggactaccaata
cctggagcagcaccagttgttcctggtaccgggttgtctgtggtgcccaatgatggggca
gctcgggcagcggcattggccgctgccatcaacttgcagcataatttggcaaaaattcaa
gctgatgcaatacctgaacactatgaagcagaactggagatcaatgattttcctcaaaat
gctcgatggaaagttactcacaaggagactttgggtccgatatcagattggactggagct
gccattaccaccaggggtcagtattttccaccaagccgggtcacaggacctggggaacgc
aaactttacttgtttattgagggtcctactgaacagtctgtcaagagagccaaggcagaa
ttaaaacgtgttttggaagacttcacaaatcaggcattatcgcttccaggtggagcacaa
ccaggcagatactcagttgtataa
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