KEGG   Mangifera indica (mango): 123209162
Entry
123209162         CDS       T07684                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
minc  Mangifera indica (mango)
Pathway
minc03030  DNA replication
minc03410  Base excision repair
minc03420  Nucleotide excision repair
minc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123209162
   03410 Base excision repair
    123209162
   03420 Nucleotide excision repair
    123209162
   03430 Mismatch repair
    123209162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:minc03032]
    123209162
   03400 DNA repair and recombination proteins [BR:minc03400]
    123209162
Enzymes [BR:minc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123209162
    6.5.1.6  DNA ligase (ATP or NAD+)
     123209162
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123209162
DNA replication proteins [BR:minc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123209162
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123209162
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123209162
   NER (nucleotide excision repair)
    Other NER factors
     123209162
   MMR (mismatch excision repair)
    Other MMR factors
     123209162
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Occludin_ELL
Other DBs
NCBI-GeneID: 123209162
NCBI-ProteinID: XP_044482906
LinkDB
Position
2:complement(19226879..19234978)
AA seq 802 aa
MIVLRSSPALLYKSLLRNLLKPTTLYHLSFSSKPFSHKPKPLSISLNPLPNMSSRPSAFD
LLMSKSRSFASRNPQASSSPNKRKTLNVQNPKPGISSTNEIQKNAEEPSLDHKKPMEIQQ
IEPQDSVEAKTAHEPVDNYERPDKKPKVVSAHERIAELKSKMVFLKEKPDNFDPKTVACW
EKGERVPFIFLSLAFDMISNESGRIVITNIVCNMLRTVIDTTPEDLVAVVYLAANRIAPA
HEGLELGIGDASIIKALAEAYGRTDAQVKKQYKEMGDLGLVAKASRLSQSMIFKRPDALS
ITKVFDTFRLIAKESGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL
AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKLVFSVLPVYDKIVSALLSGGVWDLPNTC
SFTLGVPVGPMLAKPTKGVSEIVNKFQDMEFTSEYKYDGERAQIHYMENGSVEIYSRNSE
RNTGKFPDVALAVSRLKKSSVKSFVLDCELVAYDRDKQKILPFQILITRARKNVSVSDIK
VDVCVYAFDMLYVNGQPLLQEQLKVRRERLYDSFQEEPGFFQFATALTSSDLDEIQKFLD
AAVDASCEGLIIKTLNRDATYEPSRRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGRGKRT
GVYGAFLLACYDSHNEEFQSICKIGTGFSEAVLEERSSSLRSKVIPKPKPYYRYADTINP
DVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKNPEQASSSEQ
VADMYSAQKHNQPNNQDDNEDD
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgatagttcttcgttcaagccctgctcttctttacaaatctttattgcgcaatctcctg
aaaccgaccacattatatcatctttctttctctagcaaacccttctctcacaaaccaaaa
cccctctccatctccttaaaccctctacccaatatgtcctctcgtccctccgctttcgat
cttctcatgtccaaatctcgctcctttgcctccaggaacccccaagcctcttcttctcct
aataagcgcaaaaccctaaatgtccaaaaccctaaaccaggaatttcatcaactaatgaa
attcaaaaaaatgctgaagaacccagtttagatcacaagaaacccatggaaattcaacag
attgaaccccaagattcagttgaggccaagacggcccatgaaccagttgataattacgaa
agacctgacaagaaaccgaaagtagtgagtgctcatgagagaattgcggaattgaagagt
aaaatggtctttttaaaagaaaaaccagataattttgatcctaaaacggtggcctgttgg
gaaaagggagagagagtgccgtttattttcttgagtttggcatttgatatgatatcgaac
gaatcagggcggattgtgattactaatattgtgtgtaatatgttgaggacagtcatcgat
acgacacctgaggacttggtggcggttgtgtatttggcggccaataggattgcaccagct
catgaaggactggagctaggaattggggatgcttctattataaaggcgcttgcagaagca
tatgggaggactgatgctcaggttaagaagcagtataaggaaatgggagatttgggcctc
gtcgccaaagcaagtcgtttatctcaatcaatgatattcaagcggccagatgcattatct
ataactaaagtttttgatacatttcggctcattgctaaggaatctggaaaagatagtcaa
gagaagaaaaagaacagaatcaaggccctccttgttgctgccaccgattgtgaacctcaa
tatttgattcgtctacttcagtcaaagttgcgaattggtttagcagagcaaactctgtta
gctgcgttgggtcaagcagctgtctacaatgaacaacattctaaaccacctccaaacatt
caatctccgttagaggaggctgcgaagattgttaaactagtgttctctgtactacctgtt
tatgataaaattgtctctgctcttcttagtggtggcgtgtgggatcttccaaatacatgc
agttttacgcttggtgtccctgttggacctatgttagccaaaccaaccaaaggggtgtct
gagatcgtaaataagttccaggatatggaattcacgtctgaatacaagtatgatggagaa
cgtgcccagatacattacatggagaacggttctgttgagatatacagtcgaaattctgaa
cgtaatactggaaagtttcctgatgttgctcttgcagtttcaagattaaagaaatcatct
gtaaaatcatttgttctagattgtgaacttgttgcttatgatcgggataaacagaagatt
ttgccctttcagatccttattactcgggcccgtaaaaatgtgtcggtgagtgatatcaag
gttgacgtctgcgtatatgcttttgacatgttgtatgtcaatgggcaaccacttcttcag
gagcaactgaaagttcgtagagagagactttacgactcgtttcaggaagaacctggattt
tttcagtttgcaacagctttgacatcgagtgatcttgatgaaatacaaaagtttcttgat
gcagctgtagatgcaagttgtgagggtttaattatcaaaacattgaatcgagatgccaca
tatgagccttcaaggcggtctcataattggttgaaactaaagaaagattatattgacagc
attggagactcgctagatttagtacccattgctgcatttcatgggcgtgggaaacgtaca
ggtgtttatggggcttttctattagcatgctatgacagccacaacgaagaattccaaagc
atttgcaaaataggcactggattttctgaagcagtgcttgaagaacgttcttctagtctc
cgctccaaagtaattccaaaaccaaagccatattaccggtatgcagataccatcaatcca
gatgtatggtttgagcccactgaggtctgggaggtgaaagctgcagatttaactattagc
cctgttcaccgtgcagcaattggtgttgtggatcctgataagggcatttcacttcggttt
ccacgtctaattcgtgttcgggaagataagaatccagagcaagcatcatcatctgagcag
gttgcagacatgtatagtgctcaaaaacacaatcaaccaaacaatcaagatgacaatgaa
gatgattga

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