Mangifera indica (mango): 123209725
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Entry
123209725 CDS
T07684
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03082
ATP-dependent chromatin remodeling
minc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123209725
03083 Polycomb repressive complex
123209725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123209725
Enzymes [BR:
minc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123209725
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
123209725
HDAC complexes
Sin3A-HDAC complex
123209725
BRAF-HDAC complex
123209725
REST complex
123209725
SHIP complex
123209725
MiDAC complex
123209725
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
123209725
Heterochromatin formation proteins
Other heterochromatin formation proteins
123209725
Chromatin remodeling factors
NuRD complex
123209725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
ANKH
Motif
Other DBs
NCBI-GeneID:
123209725
NCBI-ProteinID:
XP_044483788
LinkDB
All DBs
Position
2:19696563..19701659
Genome browser
AA seq
431 aa
AA seq
DB search
MKPHRLCMAHHLVLSYELHKKMEVYRPHKAYPVELAQFHSAEYVEFLHRITPDTQHLFSH
ELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG
FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDMFFPGT
GDVKEIGEREGKYYAINVPLKDGIDDTSFTRLFKTIISKVVETYVPGVIVLQCGADSLAG
DRLGCFNLSIDGAYIFLVGNGSIDFVVVNFSFVATLFAGHAECVRFVKKFNLPLLVTGGG
GYTKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPECSLRIPTGHIENLNSKSYLST
IKMQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEFYE
GDNDNDHMEVG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagccacatcggctttgtatggcacaccatctcgttctatcatatgagcttcacaag
aagatggaagtttatcgtccccacaaggcctaccctgtggagcttgcacagttccattct
gctgagtatgttgaattcttacaccggattacccctgacactcaacatttgttctcacat
gaattagctaaatataatcttggagaagattgccctgtctttgaaaacttgttcgaattt
tgtcaaatttatgctggtgggacaatagatgctgcacgtagattaaacaatcagctctgt
gacattgccataaattgggcgggggggttacaccatgcgaagaagtgtgaagcttctggt
ttctgttacattaatgacttggtcttggggatcttggagcttttgaaataccatgcccgt
gtgttgtatattgatatagatgtccatcatggagatggtgttgaagaagctttttatttc
acagacagggtgatgactgttagttttcacaagtttggggatatgttctttcctggaact
ggggatgttaaggaaataggagaaagagaaggcaaatattatgctataaatgtcccactc
aaggatggaattgatgacactagcttcactcggcttttcaagacaattatctccaaggtt
gttgagacatatgtaccgggtgtcatagttcttcaatgtggggcagattctcttgctgga
gatcgcttaggctgtttcaatctctccattgatggtgcatatatctttctagttggcaat
ggttcaatcgattttgttgttgtcaacttttcctttgtggcaacactttttgcagggcat
gctgaatgtgttcggtttgtgaagaaattcaatttgcccttgctggttacaggaggtggg
ggatacacaaaagaaaatgttgctcgatgttggactgttgaaacaggagtacttttggat
acagagcttcccaatgagatcccagagaatgaatacatcaagtattttgcccctgaatgt
tcattgaggattccaacagggcatatagagaatttgaatagcaaatcatatcttagcaca
ataaaaatgcaagtattggaaaatcttcggtgcatccaacatgctccaagtgttcaaatg
caggaggttccacctgacttctatattcctgattttgatgaggatgagcagaaccctgat
gaacgagtggatcagcacactcaagacaagcaaatccaacgtgatgatgaattttatgaa
ggagacaatgataatgatcacatggaggttgggtaa
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integrated database retrieval system