Mangifera indica (mango): 123216931
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Entry
123216931 CDS
T07684
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123216931
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123216931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
123216931
NCBI-ProteinID:
XP_044493532
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All DBs
Position
5:complement(12574683..12580314)
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AA seq
633 aa
AA seq
DB search
MAQPSSDRLSSTDSAEALNFLILDTEDKIINSNILNSQDADPIGTRRDIVDQSSALGSVG
YQKMGYASTASSRPPLLYNGSYDNVAGKQGAFLPYINNKVLENGSHIQGIQDKPPSVAYH
GYVCSPQMLRKPYGPVTTHLSARNHGHLYNAREISTSDAFSFKQNISPNSYILSPTPVSQ
AKLLVPNDLQWDSKRSGLRPNFPAPLGSSGRGANLFGKSDGLGLLDQGFEGSEVGGLWSD
WLSPSDGKSCMLQLSSPQTSLKPIESPELSQYEFGLASLQKGSFYSFGSCSGSSYTGYSH
RQSDQASDFGCGSSSRMGLNGQSWPTLTEARQRGRCNDFSCGCSVTLDMLSERNRGPRAF
KPKFRTMVNGSAVGNSKNSIIDDLLRNSYNRLDFITSYKDAKFFVIKSYSEDNVYKSIKY
GVWASTPNGNKKLDCAYSEAKAKEGMCPIFLFFSVNASAQFCGVAEMVGPVDFDKNVDYW
LQDKWSGQFPVKWHIIKDVPNSQFRHILLENNDNKPVTNSRDTQQVEMEQGMVMLNIFKN
YELCSSILDDFYFYEKRHKAMQERKAGQQQASLMAPPVVAVSEQQIPVSPSADTLKSMSK
SFAEAVSLTEHEKEHSAGGKVASAATTSVAHGS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccaagttctgatcgtttatcctctactgactctgctgaagctttaaacttt
ttgatcctggatactgaagataaaatcatcaattcaaacattttgaatagtcaggatgcc
gatccaattggtactcgaagagatattgttgatcaatcatcagctttaggttccgttgga
tatcagaagatgggatatgcatccacagcctcctctcggccgccattattgtacaatgga
agctatgacaatgtagctggtaaacagggtgcatttctaccatatattaataataaagtc
ctggaaaatggttctcatatacagggcatccaggataaacctccatctgttgcatatcat
ggctatgtatgcagccctcaaatgctacgcaaaccatatggtcctgtcacgacacatctt
tctgccaggaatcatggccatttgtacaatgctagagaaatttcaacttctgatgcattt
tctttcaagcaaaatatttctccaaattcatacattctttcaccaactccggtttctcaa
gcaaagttgttagtacctaatgatctccaatgggatagcaaaagatctggtctgagacct
aacttcccagctccattgggatcttctggtaggggagcaaacctttttggaaaatctgat
gggcttggtttgttggaccaagggtttgagggatctgaagttggaggattatggtcagat
tggttgagtccctcagatgggaagagttgcatgcttcaattgtcttcaccacaaacttct
ctgaaaccaattgagtcaccagagttgtctcagtatgagttcggacttgcttctttacag
aaaggatcattttatagctttggatcttgttcaggctccagctacacaggttactctcac
cgtcaaagtgatcaagcctccgattttggatgtggctccagttctaggatgggactgaat
ggtcaaagctggcccacacttactgaagcaagacaaagaggaagatgcaatgacttttca
tgtggctgtagtgtcacacttgatatgctaagtgagcgaaatagaggaccgagggcattt
aagccaaaatttcggacaatggtaaatggttctgctgttggtaatagcaagaattccatt
attgatgaccttcttaggaactcttataacagattggattttatcaccagctataaagat
gcaaagttcttcgtcataaaatcttatagtgaagataatgtttacaagagcataaaatat
ggtgtctgggctagcaccccgaatggcaacaaaaagttagattgtgcttattctgaagca
aaggcaaaagagggcatgtgcccaatctttctgtttttttcggtgaatgctagtgcccag
ttttgtggtgtggcagagatggtgggacctgtagactttgacaagaatgtagactattgg
ctgcaggataagtggtctggacagttccccgttaagtggcacatcataaaggatgttcct
aacagtcagtttcgtcacattctacttgaaaataatgacaacaaaccagttactaatagt
agagatactcaacaggtggaaatggaacaggggatggtgatgttaaacatatttaagaac
tacgaattgtgttcctccatcctagatgatttttatttttatgagaagcggcacaaagcc
atgcaagaaaggaaggcaggacaacagcaggcaagtcttatggctcctccagtggtagca
gttagtgagcaacaaattccggtttcaccatctgctgacaccctaaagagcatgtcaaag
agcttcgccgaagctgtgtcattgacagagcatgaaaaagaacattcagctggtgggaag
gttgcctcagccgcaaccacctctgtggcccatggaagttaa
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