KEGG   Mangifera indica (mango): 123223648
Entry
123223648         CDS       T07684                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
minc  Mangifera indica (mango)
Pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123223648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123223648
   03041 Spliceosome [BR:minc03041]
    123223648
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123223648
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123223648
Spliceosome [BR:minc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123223648
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM
Other DBs
NCBI-GeneID: 123223648
NCBI-ProteinID: XP_044502854
LinkDB
Position
8:complement(9622093..9625846)
AA seq 372 aa
MDPDANEPNFDPETDDLHRSCDHAEDDKSHPHTGDGASPGKIFIGGLARETTSAQFIKHF
GKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIQEDHVINGKQVEIKRTIPKGAI
GSKDFKTKKIFVGGIPATVNEDEFKDFFMQYGEVQEHQIMRDHSTNRSRGFGFITFETEE
AVDDLLAKGNKLELAGSQVEVKKAEPKRPNPPQPSYRRYNNSKPAYDSGFGDAYGGYGGG
AFSGGGSSGYRSGGAYGIRAGSYGGYSAGEYGGYGGYGGGMGGYRGEPSLGYSGRYGGFN
RGYDLAGDYGGPIESYGGYGGGAGASGGYGNGPSGYDVGLGGGYGSSGGVSFFGNRGGYG
GAGSSRYHPYGR
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggacccagatgccaacgaacccaactttgaccctgaaactgacgaccttcatagatcc
tgtgaccacgctgaagatgacaagtctcaccctcacaccggcgacggagctagccccgga
aaaatttttattggaggtttagctagggagacaacttcagcacaatttatcaagcatttt
gggaaatatggtgaaattacggattctgtgataatgaaggaccggaaaacagggcagcct
cgtggatttggttttgtcacttatgcagatccctctgtggttgataaagtcattcaagaa
gatcatgttattaatgggaaacaagtggaaattaagcgaactataccaaagggagctatt
ggttctaaagatttcaaaaccaagaagatttttgttggtggaattccagcaacagtgaat
gaagatgaattcaaagacttctttatgcaatatggagaggtccaagagcaccaaatcatg
cgggatcattccaccaatcgttcacgtggttttggatttattacttttgaaacagaagaa
gcagttgatgatctcttggccaaggggaacaagcttgagcttgctggctctcaggtggag
gtcaagaaggcagagccaaagagaccaaacccacctcaaccctcttatagacgatacaat
aattctaagccagcatatgatagtgggtttggggatgcttatggtggatatggaggtgga
gcgttcagtggtggcggaagttctggctataggtctggtggggcatatggaattagagct
ggttcttatggaggatacagtgctggtgaatatggtggatatggaggatatggtggtggt
atgggtggttacaggggggagccctcccttggatactcaggtcgctatggaggctttaat
agaggttatgatctggctggtgattatgggggccctattgagagttatggaggatatggt
ggcggtgcaggtgccagtggtggctatggaaatggcccaagtggctatgatgtgggcctt
gggggtggctatggaagcagtggcggggtttctttctttggaaatagagggggatatggt
ggtgcaggaagcagtaggtatcatccctacgggaggtag

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