Mangifera indica (mango): 123225071
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Entry
123225071 CDS
T07684
Name
(RefSeq) structural maintenance of chromosomes protein 2-1
KO
K06674
structural maintenance of chromosome 2
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123225071
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
123225071
Condensin II
123225071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
PspA_IM30
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123225071
NCBI-ProteinID:
XP_044504855
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All DBs
Position
9:3146481..3156603
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AA seq
1176 aa
AA seq
DB search
MYIKEICLEGFKSYASRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSIVFDNSDRNRSPLGYEEHPEITVTRQIVVGGRNKYLINGK
LSQPSQVQTLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKES
ALKTLEKKQSKVDEMNNLLDQEILPALEKLRKERTQYMQWANGNAELDRLRRFCIAYEYV
QAEKIRDSAVGEVEQVKAKIAEIDDDTKSTDLKIEEMEKQVSNLSAEKEASMGGEVRILS
EKVDAISQDLVREVSVLNNKDDTLRSEKENAEKIVHNIEELKQSVEEKASAVRKSEEGAA
DLKMRVEELSKSLEEYEKDYQGVLAGKSSGKEEKCLEDQLGDAKVAVGSAETELKQLKTR
ISHCEKELKEKRHQLMSKREEAISVENELNVRRKDVENIKQALESVPYKEGQMEVLQRDR
TSEMELVQKLKDDIRDLSAHLANVQFTYCDPVKNFDRSKVKGVVAKLIKVKDSSTMTALE
VTAGGKLFNVIVDTENTGKQLLQNGDLRRRVTIIPLNKIQANTVPSRVQQAAARLVGKEN
AELALSLVGYSDELKSAMEYVFGSTFVCKSIDSAKEVAFNHEIRTPSVTLEGDIFQPSGL
LTGGSRKGGGDLLRQLHNLAEAESNLLIHQKKLSEIEAKIKELLPLQKKFMDLKSQLELR
SYDLSLFEGRAEQNEHHKLGEMVKKIEQELEEAKAAAKEKQVLYEKCVSTVSMLEKSIKE
HDNNREGILKDLEKKIKAVKVQMQSASKDLKRHENERERLVMEQEAITKEQASLENQLAA
LKLQINGLTSEVEAQKAKVASTRNYHDQAQSELNSIRLKMKECDSQISGIVKEQQKLQHK
LSETRLERKKLENEVKRMEMEQKDCSTKVDRLIEKHAWISSEKQLFGRSGTDYDFSSRDP
IKAREELEKLQAEQSGLEKRVNKKVMSMFEKAEDEYHDLMSKKNIIENDKSKIKKVIEEL
DEKKKETLKVTWVKVNKDFGSIFSTLLPGTMGKLEPPEGGSFLDGLEVCVAFGGVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKTHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVATKQTN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaagagatatgcttggaggggttcaaatcctatgcgtcaaggacagtggta
ccgggttttgatccgtattttaatgcgataacgggtctaaatgggtctggaaaatccaat
attctggattcaatttgtttcgttttgggtataaccaatttgcaacaggttcgtgcttcg
aaccttcaggagcttgtgtacaagcaaggccaagctggaattactaaagctactgtttcc
atcgtgtttgataattctgataggaatcgaagccctcttggatatgaggaacatccagag
attactgtcactcgacagattgtggttggtggaaggaacaaatatcttatcaatggaaaa
ctttctcagcctagtcaagtccaaaccctctttcattcagtgcagctcaatgttaacaat
ccacattttctcataatgcaaggtcgaatcaccaaggtcttaaatatgaaacccccagaa
attctttctatgcttgaagaggctgctgggacaagaatgtatgaaacaaagaaagagtct
gcattgaaaacacttgagaagaagcagagtaaggttgatgagatgaataatcttcttgac
caggaaatattgcctgctttggagaaactaaggaaagaacgaactcaatacatgcaatgg
gctaatggcaatgctgaattagatcgactaagaaggttctgcattgcctatgaatatgtt
caagccgaaaagatcagagacagtgcagttggggaagtggaacaggtgaaggcaaagatt
gctgaaatcgatgacgatacaaaaagcacagatttgaaaatagaggaaatggaaaagcaa
gtatcaaacttgtctgctgaaaaggaagccagcatgggtggggaagtcagaattttgtca
gagaaagtagatgcaatatctcaagatcttgtgcgtgaagtgtctgtattgaataacaag
gatgacacactcaggagtgagaaagagaatgctgaaaagattgttcataatattgaagag
ctgaagcaatctgtagaagagaaggcctctgctgtcagaaaatctgaagaaggagctgcc
gatctcaaaatgagagttgaagaactttctaagagcctggaagagtatgaaaaagattac
cagggtgtactagctgggaagagcagtgggaaggaggagaaatgccttgaagaccagcta
ggcgatgccaaggtcgctgttgggagtgctgaaactgaattgaaacaactgaaaactaga
ataagtcattgtgagaaggagttgaaagagaaaagacatcagttaatgtcaaagcgtgag
gaagctatttctgtagagaatgaactgaatgttagaagaaaagatgtagaaaatattaaa
caagcgttggaatctgttccatataaagagggccagatggaagtgttacaaagggaccgc
acatctgagatggagttggtgcagaagttgaaggatgatatacgggatctttcagctcat
ttagcaaacgtgcagttcacatactgtgatcctgtgaagaattttgatagatcaaaggtt
aagggtgtggttgctaaacttattaaagtaaaggatagctccacaatgactgccttagag
gtgactgctggaggaaaattatttaatgttattgtagacactgaaaatactggaaaacaa
ctgcttcaaaatggtgatcttcggaggagagtaacaatcattcctttgaataaaattcaa
gccaatactgttccttccagagttcagcaggctgctgctagattggttggcaaggaaaat
gccgaacttgctctttctttggttggctacagtgacgaattaaagagtgctatggaatat
gttttcggttctacctttgtctgcaaaagcattgattctgcaaaagaggttgcttttaat
catgaaattcgcactccaagtgttacacttgaaggtgatatatttcagcccagtggtctt
ctaactggtggaagccgcaagggtggaggtgatctgttaaggcaacttcataatttagcg
gaggctgaatctaatcttttgatacatcagaaaaagctatctgaaattgaagcgaagata
aaggaacttctgcctcttcagaaaaagtttatggaccttaaatctcagttagaactaaga
tcatatgatctttcattattcgagggtagggctgagcaaaatgagcatcacaagcttggt
gagatggtgaagaagattgaacaagagcttgaagaagcaaaagctgctgccaaagagaag
caagttttgtatgaaaaatgtgttagtacagtgtcgatgcttgagaaatcaatcaaagag
catgataataatcgagagggcatactcaaagatttagagaaaaagattaaggctgtaaaa
gttcaaatgcagtcagcttcaaaggatctaaagaggcatgaaaatgaaagagagagactt
gttatggagcaggaagcaatcaccaaggaacaagcatctttagagaatcaattagctgca
ttgaaattgcagattaatggtctcacttcagaagtagaagcacaaaaagccaaggttgct
tccacgcggaattatcatgatcaagcacagtctgagctcaattcgattcgtttaaagatg
aaggaatgtgactctcaaattagtggcattgtaaaggagcagcagaaacttcaacataag
ctcagtgagacaagacttgagaggaagaagctggaaaatgaggtaaaacggatggagatg
gagcagaaagattgctctacaaaggttgacagattgattgaaaagcatgcctggatttca
tctgagaaacagctatttggaagaagtggaacagattatgatttttcatcccgtgatcct
attaaagccagggaagagctcgagaaacttcaagccgagcaatcaggcctggagaaaagg
gttaacaagaaagttatgtcaatgtttgagaaagcagaagatgagtaccatgatttgatg
tccaagaaaaacattattgagaatgacaagtctaaaatcaagaaggtcattgaagagcta
gatgagaagaagaaggaaactctaaaagttacttgggtcaaagtcaacaaagactttgga
tcaatcttttctactttgttacctggcacaatgggaaagctagaacctcctgaaggtggt
agcttccttgatggtctagaagtttgtgttgcttttggaggtgtttggaaacagtccttg
tcagaactgagcggaggtcaaagatctctactagcactatctttgattttagcattgctt
ctcttcaagccagctcctctttatatactggatgaggttgatgcagcccttgatttaagt
cacacgcaaaacatagggagaatgatcaagactcactttcctcattcacagtttattgtg
gtttcgctaaaagaaggcatgttcaacaatgctaatgttctcttccggacaaaatttgtg
gatggtgtgtctactgttcagaggactgtggctacaaagcagaccaactga
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