Mesotoga infera: MESINF_1730
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Entry
MESINF_1730 CDS
T05565
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
minf
Mesotoga infera
Pathway
minf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MESINF_1730 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minf03019
]
MESINF_1730 (rny)
Messenger RNA biogenesis [BR:
minf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MESINF_1730 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Ribosomal_S18
CemA
Motif
Other DBs
NCBI-ProteinID:
SSC13174
UniProt:
A0A7Z7PPK8
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All DBs
Position
MESINF:complement(1798076..1799614)
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AA seq
512 aa
AA seq
DB search
MILVIVGIMVGLAAGFTLAYYILIPRAVKKVKDDLQNQLKAAKQDSESILKRANEEAEHL
KKKALIEGREELHKLREEQEKEFKRDREELKQWEERISRREDNIDKKEETIEKARQQVEN
ERIAVETMKEEAEKKLFHLSELTMEEARDIVLKRAEEIYEHDLAQKLKQLKDQYDEEGSR
YAKWVIVNSIQRYAADYTGDVTVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGSDLVIDD
TPEVVVVSCFNPLRRAIAKMTLDKLVEDGRIHPARIEEMYEKSKKEIYNEIKEAGQEALM
KVGIPSMHPELVKLLGRLKFRTSYGQNVLQHSIEVAHLAALMASELGLNVDKVKRGAILH
DIGKAVDHEIEGSHSIIGGEIAKRFGEKNQVVNMIQYHHGETEAITPEAVLVAAADAVSA
SRPGARRESLDMYIKRLESLENIATGFKHIEKAYAIQAGREIRVIVEPEKVDDILAEKLA
MDIAKKIEEELEYPGVIKVTVIRERRSVSYAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtaatagttggaataatggtcggtctggcagccggatttaccctggcctat
tatatattgattcctcgggccgtcaaaaaagtaaaagatgatttgcaaaatcagcttaaa
gcggctaaacaagactcggaatcgatactaaaaagggcaaacgaagaggccgaacacctc
aaaaagaaagccttgatcgagggcagagaagaattacataaactgagggaagagcaagaa
aaggagttcaagagagacagggaagaactcaagcaatgggaagaaaggatctcaagaaga
gaggacaacatcgataagaaggaagagactatcgaaaaggcgagacaacaggtcgagaat
gaaaggatagcggtggagaccatgaaagaagaggccgaaaagaaattattccacctttcc
gaactcaccatggaagaagccagagatattgtcctcaagagagccgaggagatatacgaa
cacgatctggcgcagaagctcaaacagcttaaagaccagtacgacgaagaggggagtcgt
tacgccaaatgggtcatcgtcaattcgatacagaggtatgcggccgactataccggagat
gtaaccgtaagcacggtgagtctgccgtccgacgagatgaagggaagaataataggtaga
gagggaagaaatataagggccttcgagaaactcaccggatcggaccttgtgatcgacgac
acgccagaagtggttgttgtctcctgtttcaaccccttaagaagggccatagcgaaaatg
actcttgacaaactggttgaagacggtagaattcatccggctcgcatagaagagatgtac
gaaaaatcgaagaaggagatttacaacgaaataaaggaagccggtcaagaagcgcttatg
aaggttgggataccttccatgcatcccgaactggtcaagcttctcggacggttgaagttc
agaaccagttacggtcagaacgtcctgcaacactccatagaagtcgcgcatctggccgct
ctaatggcttcggagctggggctgaacgttgacaaggtcaagcgcggggctatactccac
gatataggaaaggccgtagatcatgaaatcgaaggatcgcactcgattatcgggggagag
atagccaagagatttggagagaagaaccaggtggtgaacatgattcagtaccaccacggc
gagaccgaagccataaccccagaggccgttctcgtggcagcggctgatgccgtttctgcg
tctagacccggtgccaggagagaatcgcttgatatgtacataaagagactggaaagcctg
gaaaacatagccacaggtttcaaacacatcgaaaaggcctacgccatacaggccggcaga
gaaatacgtgttatcgtcgagcctgagaaagtggatgatatactggctgaaaagctggcg
atggacatagccaaaaagatcgaagaagaacttgaatacccaggagttatcaaggtaact
gtcatcagggaacgcaggagcgtttcctacgcgtcgtga
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