Macadamia integrifolia (macadamia nut): 122058264
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Entry
122058264 CDS
T07436
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03420
Nucleotide excision repair
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122058264
09124 Replication and repair
03420 Nucleotide excision repair
122058264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122058264
03400 DNA repair and recombination proteins [BR:
ming03400
]
122058264
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
122058264
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122058264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
PQQ_3
Motif
Other DBs
NCBI-GeneID:
122058264
NCBI-ProteinID:
XP_042476810
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Position
2:complement(9526252..9533105)
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AA seq
574 aa
AA seq
DB search
MPPQTRRMAFPRIVIERDTDSEQSSEEEDEEEVVEEEEEEEEEEEEDTLRAVAEEDEEEV
AEKAEGGKMGGKLMDASDAKKKDKAPITISLKNVCKVCKRKGHQAGFKGATYIDCPMKPC
FLCKMPGHTTMNCPHRVAVEHGVIPAPHKNTGRPLDYVFERQLRSDVTMIKPAFVIPNQV
DCGVIRYHSRRITCLEFHPTNDNILLSGDKKGQLGVWDYGKVYEKTVYGNIHSCILNNMR
FNPSNDGTLYAASSDGTVSCTDLETGMSFPLMDVNPDGWQGPSSWRMLYGMEINPEKSLV
LVADNFGYLYMVDMRSNKKTGDTILIHKKGSKVVGLHCNPVQPEILLSCGNDHFARIWDV
RRLGVGSSLYDLRHSRVVNSAYFSPQSGSKILTTAQDNRLRVWDYIFGNLDAPSREIVHS
HDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDTSTGRLVDEVMEPN
ITTISPVNKLHPRDDVMASGSSRSIFIWKPKEKSQGKDEKKMILCGKAGKTEKKFGGESD
DDSDGDTFSSKGKNSKYKKPTSKSSSSDLKKRKR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcaaaccagaagaatggcgttccccagaattgtgattgagagggacactgat
tctgaacaaagttcagaagaagaagacgaagaagaagttgtagaagaagaagaggaggag
gaagaggaagaggaagaggatacgcttagggctgttgccgaagaagatgaagaagaagtt
gcagagaaggcggaaggcgggaaaatgggagggaagcttatggatgcttccgatgcgaag
aagaaagacaaagcgccgataaccattagtctcaagaatgtttgtaaagtctgcaagaga
aagggacaccaagcaggatttaagggcgctacctacatcgattgccctatgaaaccatgc
ttcctttgtaaaatgcctgggcacacgaccatgaattgcccacatcgagtagctgtggag
catggggtgatccccgctccccacaagaacaccggaagacctttggattatgtatttgaa
cgccaacttaggtctgatgttaccatgatcaagccagcttttgtgatccccaatcaagtg
gactgtggtgttattagataccacagtaggcgtataacctgcctggagtttcatccaacc
aacgacaacattcttctatcgggagataagaaaggacaacttggagtgtgggattatggt
aaagtatatgaaaagacagtgtatggaaacatacattcttgtatacttaataatatgagg
ttcaatccatctaatgatggaactttatatgcagcatcctcggatgggacggtcagttgc
actgacttggagactggaatgtcatttcctcttatggacgtcaatcccgatggatggcag
ggtccaagtagctggaggatgctttatggcatggaaatcaatccagagaagagtcttgtg
cttgttgcagataattttggatatctatacatggtggatatgcgctccaacaagaaaacc
ggagataccattttgatccataagaaaggtagcaaagtagttgggcttcactgcaatcct
gttcagccagagattctcttgagttgtggaaatgatcactttgctcgtatatgggatgtg
cgccgacttggggttggatcttccctatatgatcttcgtcacagccgtgttgtaaactca
gcgtatttctccccacaatctggaagcaagattcttactacagctcaggacaaccgcctt
cgagtatgggattatatctttggcaatttggacgcccctagcagagagatagtacatagc
catgatttcaataggcatttgaccccttttcgagctgaatgggacccaaaggacccatcg
gagtccctggcagttattggccgctacataagtgagaattataatggagctgccttgcat
cccattgatttcatcgatacaagtacaggtcgactggttgatgaggtgatggaaccaaac
atcacaaccatcagtcccgttaataagctacacccaagagatgatgtcatggcatctggt
agttcaaggtcgatttttatttggaagcccaaggagaagtcccaagggaaggatgaaaag
aagatgattctttgtggaaaagctggcaaaaccgaaaagaaatttggtggtgaaagcgat
gatgattctgatggtgatacattcagctccaagggtaagaactccaaatacaagaaacct
acatcaaagtctagttctagtgatctaaaaaagaggaagcgctga
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